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ot_convert_etl_format's Introduction

Open Targets Platform Converter

Running locally

If authentication is already set up you don't need to do anything, as Google Application Default Credentials (ADC) resolution mechanism will find the appropriate credentials in the default location.

You can also use environment variables or Google Secret Manager.

Create a jar file with the sbt assembly command from the directory containing the build.sbt file. A jar file will be generated in the /target/scala-2.12/ directory.

To run the jar use the following command to display the help text:

java -jar target/scala-2.12/ot-conversion-format.jar --help

Using environment variable

export GOOGLE_APPLICATION_CREDENTIALS="<path to secret key json file>"

Using Secret Manager

  1. If you don't already have authorisation set-up, create a new Key on an appropriate service account and save that json file locally.
  2. Add that key to GCP Secret Manager
  3. Run gcloud auth login --update-adc to configure local account to use Secret Manager keys.

Dependency documentation

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