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Avogadro-squared git clone fails

On Ubuntu 16.04, when I try
git clone --recursive git://github.com/cryos/avogadro-squared.git

I get the error:

Cloning into 'avogadro-squared'...
remote: Counting objects: 91, done.
remote: Total 91 (delta 0), reused 0 (delta 0), pack-reused 91
Receiving objects: 100% (91/91), 18.29 KiB | 0 bytes/s, done.
Resolving deltas: 100% (50/50), done.
Checking connectivity... done.
Submodule 'avogadro' (git://github.com/cryos/avogadro.git) registered for path 'avogadro'
Submodule 'avogadrovtk' (git://github.com/cryos/AvogadroVTK.git) registered for path 'avogadrovtk'
Submodule 'eigen' (git://github.com/cryos/eigen.git) registered for path 'eigen'
Submodule 'openbabel' (git://github.com/openbabel/openbabel.git) registered for path 'openbabel'
Submodule 'openqube' (git://github.com/cryos/openqube.git) registered for path 'openqube'
Cloning into 'avogadro'...
remote: Counting objects: 57465, done.
error: inflate: data stream error (incorrect data check) MiB/s   
fatal: pack has bad object at offset 57445900: inflate returned -3
fatal: index-pack failed
fatal: clone of 'git://github.com/cryos/avogadro.git' into submodule path 'avogadro' failed

I would appreciate any help in fixing this problem.

Avogadro-squared git clone fails

On Ubuntu 16.04, when I try
git clone --recursive git://github.com/cryos/avogadro-squared.git

I get the error:

Cloning into 'avogadro-squared'...
remote: Counting objects: 91, done.
remote: Total 91 (delta 0), reused 0 (delta 0), pack-reused 91
Receiving objects: 100% (91/91), 18.29 KiB | 0 bytes/s, done.
Resolving deltas: 100% (50/50), done.
Checking connectivity... done.
Submodule 'avogadro' (git://github.com/cryos/avogadro.git) registered for path 'avogadro'
Submodule 'avogadrovtk' (git://github.com/cryos/AvogadroVTK.git) registered for path 'avogadrovtk'
Submodule 'eigen' (git://github.com/cryos/eigen.git) registered for path 'eigen'
Submodule 'openbabel' (git://github.com/openbabel/openbabel.git) registered for path 'openbabel'
Submodule 'openqube' (git://github.com/cryos/openqube.git) registered for path 'openqube'
Cloning into 'avogadro'...
remote: Counting objects: 57465, done.
error: inflate: data stream error (incorrect data check) MiB/s   
fatal: pack has bad object at offset 57445900: inflate returned -3
fatal: index-pack failed
fatal: clone of 'git://github.com/cryos/avogadro.git' into submodule path 'avogadro' failed

I would appreciate any help in fixing this problem.

Build fails due to hash miss-match, Zlib 404s

Cmake fails to build owing to the following error:
-- verifying file...
file='/home/terminal/avogadro-build/zlib-1.2.8.tar.gz'
-- MD5 hash of
/home/terminal/avogadro-build/zlib-1.2.8.tar.gz
does not match expected value
expected: '44d667c142d7cda120332623eab69f40'
actual: 'd41d8cd98f00b204e9800998ecf8427e'
-- File already exists but hash mismatch. Removing...
-- Downloading...
dst='/home/terminal/avogadro-build/zlib-1.2.8.tar.gz'
timeout='none'
-- Using src='http://zlib.net/zlib-1.2.8.tar.gz'
-- Retrying...
-- Using src='http://zlib.net/zlib-1.2.8.tar.gz'
-- Retry after 5 seconds (attempt #2) ...
-- Using src='http://zlib.net/zlib-1.2.8.tar.gz'
-- Retry after 5 seconds (attempt #3) ...
^Cmake[2]: *** [CMakeFiles/zlib.dir/build.make:90: zlib-prefix/src/zlib-stamp/zlib-download] Interrupt
make[1]: *** [CMakeFiles/Makefile2:73: CMakeFiles/zlib.dir/all] Interrupt
make: *** [Makefile:84: all] Interrupt

Cmake instructions missing build step

The instructions on the wiki for the linux/osx build get as far as

cmake ../avogadro-squared

but don't get all the way to actually building, which should be

cmake --build .

I don't have access to the wiki to make this change.

Great work on this repo by the way, makes the build process far less painful.

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