ctberthiaume / gdcp Goto Github PK
View Code? Open in Web Editor NEWscp like tool to interact with Google Drive from the command-line
License: Other
gdcp's People
Contributors
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Forkers
tuksik tolismoure falco0227 prostoroman tha1k1d sonnyad bfinc lfikyoto drrrkcodet julianocristian liveid-org scivm aaxd sctsui defendi martincastellano brianjzechgdcp's Issues
ssl crash
01/15/2015 03:48:14 PM INFO gdcp : Uploaded 100.00%. 3202322094 bytes in 33m0.00s (1.58MB/s)
01/15/2015 03:48:14 PM INFO gdcp : Calculating MD5 checksum for /Old_3TB/Cedar/velvet/100819_Illumina/628HVAAXX_5_1.fastq
01/15/2015 04:29:53 PM INFO gdcp : MD5 OK. c2bb21244112fed9aea01824a5f53ef8 (local) == c2bb21244112fed9aea01824a5f53ef8
01/15/2015 04:29:53 PM INFO gdcp : Uploading /Old_3TB/Cedar/velvet/100819_Illumina/628HVAAXX_5_2.fastq, mimeType=application/octet-stream
Traceback (most recent call last):
File "/usr/local/bin/gdcp", line 941, in <module>
main()
File "/usr/local/bin/gdcp", line 38, in main
cli()
File "/usr/local/bin/gdcp", line 832, in cli
args.func(args)
File "/usr/local/bin/gdcp", line 897, in cli_upload_file
not args.no_checksum)
File "/usr/local/bin/gdcp", line 514, in upload_folder
drive, subdir, parent_id=folder_id, checksum=checksum)
File "/usr/local/bin/gdcp", line 514, in upload_folder
drive, subdir, parent_id=folder_id, checksum=checksum)
File "/usr/local/bin/gdcp", line 514, in upload_folder
drive, subdir, parent_id=folder_id, checksum=checksum)
File "/usr/local/bin/gdcp", line 509, in upload_folder
drive, onefile, parent_id=folder_id, checksum=checksum)
File "/usr/local/bin/gdcp", line 374, in upload_file
status, response = request.next_chunk()
File "/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/oauth2client/util.py", line 135, in positional_wrapper
return wrapped(*args, **kwargs)
File "/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/googleapiclient/http.py", line 801, in next_chunk
headers=start_headers)
File "/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/oauth2client/util.py", line 135, in positional_wrapper
return wrapped(*args, **kwargs)
File "/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/oauth2client/client.py", line 547, in new_request
redirections, connection_type)
File "/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/httplib2/__init__.py", line 1593, in request
(response, content) = self._request(conn, authority, uri, request_uri, method, body, headers, redirections, cachekey)
File "/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/httplib2/__init__.py", line 1335, in _request
(response, content) = self._conn_request(conn, request_uri, method, body, headers)
File "/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/httplib2/__init__.py", line 1300, in _conn_request
conn.connect()
File "/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/httplib2/__init__.py", line 1021, in connect
self.disable_ssl_certificate_validation, self.ca_certs)
File "/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/httplib2/__init__.py", line 80, in _ssl_wrap_socket
cert_reqs=cert_reqs, ca_certs=ca_certs)
File "/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/ssl.py", line 392, in wrap_socket
ciphers=ciphers)
File "/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/ssl.py", line 148, in __init__
self.do_handshake()
File "/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/ssl.py", line 310, in do_handshake
self._sslobj.do_handshake()
ssl.SSLError: [Errno 8] _ssl.c:510: EOF occurred in violation of protocol
Exits when ownership transfer fails
gdcp exits with an error when attempting to ownership transfer fails (perhaps due to insufficient permissions). The correct behavior would be to gracefully note the failed transfer and continue.
error downloading google doc
gdcp doesn't know how to download google doc files which should normally be converted to docx, xlsx, etc before download. Here it was trying to download a Google Doc spreadsheet. Google Docs have 0 file size in Google Drive which causes gdcp to crash.
Traceback (most recent call last):
File "/Users/chrisbee/bin/gdcp", line 912, in <module>
main()
File "/Users/chrisbee/bin/gdcp", line 38, in main
cli()
File "/Users/chrisbee/bin/gdcp", line 804, in cli
args.func(args)
File "/Users/chrisbee/bin/gdcp", line 821, in cli_download_file
failed = download_by_file_id(args.drive, args.id, not args.no_checksum, args.target)
File "/Users/chrisbee/bin/gdcp", line 172, in download_by_file_id
failed = download_file(drive, downfile, checksum=checksum, root=root)
File "/Users/chrisbee/bin/gdcp", line 190, in download_file
drive, onefile, checksum=checksum, root=folder_path)
File "/Users/chrisbee/bin/gdcp", line 195, in download_file
file_size = int(afile["fileSize"])
File "/Users/chrisbee/Library/Python/2.7/lib/python/site-packages/pydrive/files.py", line 113, in __getitem__
raise KeyError(e)
KeyError: KeyError('fileSize',)
Upload error
With gdcp version 0.7.2
Uploading a directory.
velvet.khmer.qc.name.fasta/SA_s13_150m_201505061430/Log
100.00% 997 0.00MB/s 1.58s MD5...OK
velvet.khmer.qc.name.fasta/SA_s13_150m_201505061430/contigs.fa
100.00% 132158880 30.17MB/s 4.38s MD5...OK
velvet.khmer.qc.name.fasta/SA_s13_150m_201505061430/stats.txt
0.00% 0 0.00MB/s 0sTraceback (most recent call last):
File "/usr/local/bin/gdcp", line 1216, in <module>
main()
File "/usr/local/bin/gdcp", line 1213, in main
cli()
File "/usr/local/bin/gdcp", line 1157, in cli
args.func(args)
File "/usr/local/bin/gdcp", line 1190, in cli_upload
checksum=not args.no_checksum)
File "/usr/local/bin/gdcp", line 82, in upload
f.upload()
File "/usr/local/bin/gdcp", line 161, in upload
self.gdcp.upload(paths=allfiles, parent=self.id, checksum=self.check_checksum)
File "/usr/local/bin/gdcp", line 82, in upload
f.upload()
File "/usr/local/bin/gdcp", line 161, in upload
self.gdcp.upload(paths=allfiles, parent=self.id, checksum=self.check_checksum)
File "/usr/local/bin/gdcp", line 82, in upload
f.upload()
File "/usr/local/bin/gdcp", line 194, in upload
status, response = request.next_chunk()
File "/usr/local/lib/python2.7/dist-packages/oauth2client/util.py", line 135, in positional_wrapper
return wrapped(*args, **kwargs)
File "/usr/local/lib/python2.7/dist-packages/googleapiclient/http.py", line 867, in next_chunk
headers=headers)
File "/usr/local/lib/python2.7/dist-packages/oauth2client/util.py", line 135, in positional_wrapper
return wrapped(*args, **kwargs)
File "/usr/local/lib/python2.7/dist-packages/oauth2client/client.py", line 547, in new_request
redirections, connection_type)
File "/usr/local/lib/python2.7/dist-packages/httplib2/__init__.py", line 1593, in request
(response, content) = self._request(conn, authority, uri, request_uri, method, body, headers, redirections, cachekey)
File "/usr/local/lib/python2.7/dist-packages/httplib2/__init__.py", line 1335, in _request
(response, content) = self._conn_request(conn, request_uri, method, body, headers)
File "/usr/local/lib/python2.7/dist-packages/httplib2/__init__.py", line 1258, in _conn_request
conn.request(method, request_uri, body, headers)
File "/usr/lib/python2.7/httplib.py", line 973, in request
self._send_request(method, url, body, headers)
File "/usr/lib/python2.7/httplib.py", line 1007, in _send_request
self.endheaders(body)
File "/usr/lib/python2.7/httplib.py", line 969, in endheaders
self._send_output(message_body)
File "/usr/lib/python2.7/httplib.py", line 833, in _send_output
self.send(message_body)
File "/usr/lib/python2.7/httplib.py", line 803, in send
datablock = data.read(blocksize)
File "/usr/local/lib/python2.7/dist-packages/googleapiclient/http.py", line 607, in read
return self._stream.read(n)
IOError: [Errno 5] Input/output error
Error when installing on Conda env
I tried to install gdcp on conda env python2.7. However, it thrown an error:
/usr/bin/env: ‘python2.7’: Argument list too long
I did steps:
- create new env: conda create -n gdcold python=2.7 anaconda
- conda activate gdcold
- pip install pydrive
- pip install backoff
- git clone https://github.com/ctberthiaume/gdcp.git
- gdcp/gdcp (error)
Please help me to solve it. Thank you very much.
conda create -n gdcold python=2.7 anaconda
Collecting package metadata (repodata.json): done
Solving environment: done
==> WARNING: A newer version of conda exists. <==
current version: 4.8.5
latest version: 4.9.2
Please update conda by running
$ conda update -n base -c defaults conda
Package Plan
environment location: /home/anaconda3/envs/gdcold
added / updated specs:
- anaconda
- python=2.7
The following packages will be downloaded:
package | build
---------------------------|-----------------
alabaster-0.7.12 | py27_0 17 KB
anaconda-2019.10 | py27_0 11 KB
anaconda-client-1.7.2 | py27_0 140 KB
anaconda-project-0.8.3 | py_0 212 KB
asn1crypto-1.0.1 | py27_0 163 KB
astroid-1.6.5 | py27_0 402 KB
astropy-2.0.9 | py27hdd07704_0 6.8 MB
atomicwrites-1.3.0 | py27_1 13 KB
attrs-19.2.0 | py_0 39 KB
babel-2.7.0 | py_0 5.8 MB
backports-1.0 | py_2 139 KB
backports.functools_lru_cache-1.5| py_2 9 KB
backports.os-0.1.1 | py27_0 15 KB
backports.shutil_get_terminal_size-1.0.0| py27_2 8 KB
backports_abc-0.5 | py27_0 12 KB
beautifulsoup4-4.8.0 | py27_0 143 KB
bitarray-1.0.1 | py27h7b6447c_0 60 KB
bkcharts-0.2 | py27_0 124 KB
bleach-3.1.0 | py27_0 228 KB
blosc-1.16.3 | hd408876_0 82 KB
bokeh-1.3.4 | py27_0 4.0 MB
boto-2.49.0 | py27_0 1.4 MB
bottleneck-1.2.1 | py27h035aef0_1 127 KB
ca-certificates-2019.8.28 | 0 132 KB
cairo-1.14.12 | h8948797_3 1.3 MB
cdecimal-2.3 | py27h14c3975_3 141 KB
certifi-2019.9.11 | py27_0 154 KB
cffi-1.12.3 | py27h2e261b9_0 218 KB
chardet-3.0.4 | py27_1003 186 KB
click-7.0 | py27_0 116 KB
clyent-1.2.2 | py27_1 18 KB
colorama-0.4.1 | py27_0 24 KB
configparser-4.0.2 | py27_0 42 KB
contextlib2-0.6.0 | py_0 16 KB
cryptography-2.7 | py27h1ba5d50_0 602 KB
curl-7.65.3 | hbc83047_0 141 KB
cycler-0.10.0 | py27_0 13 KB
cython-0.29.13 | py27he6710b0_0 2.2 MB
cytoolz-0.10.0 | py27h7b6447c_0 422 KB
dask-1.2.2 | py_0 11 KB
dask-core-1.2.2 | py_0 539 KB
dbus-1.13.6 | h746ee38_0 587 KB
decorator-4.4.0 | py27_1 18 KB
defusedxml-0.6.0 | py_0 23 KB
distributed-1.28.1 | py27_0 852 KB
docutils-0.15.2 | py27_0 742 KB
entrypoints-0.3 | py27_0 12 KB
enum34-1.1.6 | py27_1 57 KB
et_xmlfile-1.0.1 | py27_0 20 KB
expat-2.2.6 | he6710b0_0 187 KB
fastcache-1.1.0 | py27h7b6447c_0 31 KB
flask-1.1.1 | py_0 73 KB
fontconfig-2.13.0 | h9420a91_0 291 KB
fribidi-1.0.5 | h7b6447c_0 112 KB
funcsigs-1.0.2 | py27_0 20 KB
functools32-3.2.3.2 | py27_1 23 KB
future-0.17.1 | py27_0 710 KB
futures-3.3.0 | py27_0 28 KB
get_terminal_size-1.0.0 | haa9412d_0 3 KB
gevent-1.4.0 | py27h7b6447c_0 2.5 MB
glib-2.56.2 | hd408876_0 5.0 MB
gmp-6.1.2 | h6c8ec71_1 744 KB
gmpy2-2.0.8 | py27h10f8cd9_2 168 KB
graphite2-1.3.13 | h23475e2_0 101 KB
greenlet-0.4.15 | py27h7b6447c_0 20 KB
grin-1.2.1 | py27_4 27 KB
gst-plugins-base-1.14.0 | hbbd80ab_1 6.3 MB
gstreamer-1.14.0 | hb453b48_1 3.8 MB
h5py-2.9.0 | py27h7918eee_0 1.1 MB
heapdict-1.0.1 | py_0 9 KB
html5lib-1.0.1 | py27_0 189 KB
icu-58.2 | h9c2bf20_1 22.5 MB
idna-2.8 | py27_0 133 KB
imageio-2.6.0 | py27_0 3.3 MB
imagesize-1.1.0 | py27_0 9 KB
importlib_metadata-0.23 | py27_0 43 KB
ipaddress-1.0.22 | py27_0 32 KB
ipykernel-4.10.0 | py27_0 145 KB
ipython-5.8.0 | py27_0 1.0 MB
ipython_genutils-0.2.0 | py27_0 38 KB
ipywidgets-7.5.1 | py_0 107 KB
isort-4.3.21 | py27_0 68 KB
itsdangerous-1.1.0 | py27_0 26 KB
jbig-2.1 | hdba287a_0 41 KB
jedi-0.15.1 | py27_0 709 KB
jinja2-2.10.3 | py_0 95 KB
jsonschema-3.0.2 | py27_0 89 KB
jupyter-1.0.0 | py27_7 6 KB
jupyter_client-5.3.3 | py27_1 135 KB
jupyter_console-5.2.0 | py27_1 35 KB
jupyter_core-4.5.0 | py_0 48 KB
jupyterlab-0.33.11 | py27_0 10.0 MB
jupyterlab_launcher-0.11.2 | py27h28b3542_0 32 KB
kiwisolver-1.1.0 | py27he6710b0_0 91 KB
krb5-1.16.1 | h173b8e3_7 1.4 MB
lazy-object-proxy-1.4.2 | py27h7b6447c_0 30 KB
libarchive-3.3.3 | h5d8350f_5 1.5 MB
libcurl-7.65.3 | h20c2e04_0 588 KB
liblief-0.9.0 | h7725739_2 4.4 MB
libsodium-1.0.16 | h1bed415_0 302 KB
libssh2-1.8.2 | h1ba5d50_0 250 KB
libtiff-4.0.10 | h2733197_2 604 KB
libtool-2.4.6 | h7b6447c_5 513 KB
libuuid-1.0.3 | h1bed415_2 16 KB
libxcb-1.13 | h1bed415_1 502 KB
libxml2-2.9.9 | hea5a465_1 2.0 MB
libxslt-1.1.33 | h7d1a2b0_0 577 KB
linecache2-1.0.0 | py27_0 24 KB
llvmlite-0.29.0 | py27hd408876_0 17.7 MB
locket-0.2.0 | py27_1 8 KB
lxml-4.4.1 | py27hefd8a0e_0 1.5 MB
lzo-2.10 | h49e0be7_2 313 KB
markupsafe-1.1.1 | py27h7b6447c_0 29 KB
matplotlib-2.2.3 | py27hb69df0a_0 6.5 MB
mccabe-0.6.1 | py27_1 13 KB
mistune-0.8.4 | py27h7b6447c_0 53 KB
mkl-2019.4 | 243 204.1 MB
mkl-service-2.3.0 | py27he904b0f_0 205 KB
mkl_fft-1.0.14 | py27ha843d7b_0 164 KB
mkl_random-1.1.0 | py27hd6b4f25_0 332 KB
mock-3.0.5 | py27_0 46 KB
more-itertools-5.0.0 | py27_0 86 KB
mpc-1.1.0 | h10f8cd9_1 94 KB
mpfr-4.0.1 | hdf1c602_3 575 KB
mpmath-1.1.0 | py27_0 972 KB
msgpack-python-0.6.1 | py27hfd86e86_1 90 KB
multipledispatch-0.6.0 | py27_0 21 KB
nbconvert-5.6.0 | py27_1 491 KB
nbformat-4.4.0 | py27_0 139 KB
ncurses-6.1 | he6710b0_1 958 KB
networkx-2.2 | py27_1 2.0 MB
nltk-3.4.5 | py27_0 2.1 MB
nose-1.3.7 | py27_2 213 KB
notebook-5.7.8 | py27_0 7.2 MB
numba-0.45.1 | py27h962f231_0 3.0 MB
numexpr-2.7.0 | py27h9e4a6bb_0 194 KB
numpy-1.16.5 | py27h7e9f1db_0 49 KB
numpy-base-1.16.5 | py27hde5b4d6_0 4.3 MB
numpydoc-0.9.1 | py_0 31 KB
olefile-0.46 | py27_0 48 KB
openpyxl-2.6.3 | py_0 158 KB
openssl-1.1.1d | h7b6447c_2 3.7 MB
packaging-19.2 | py_0 30 KB
pandas-0.24.2 | py27he6710b0_0 10.9 MB
pandoc-2.2.3.2 | 0 20.8 MB
pandocfilters-1.4.2 | py27_1 13 KB
parso-0.5.1 | py_0 68 KB
partd-1.0.0 | py_0 19 KB
patchelf-0.9 | he6710b0_3 71 KB
path.py-11.5.0 | py27_0 54 KB
pathlib2-2.3.5 | py27_0 36 KB
patsy-0.5.1 | py27_0 375 KB
pcre-8.43 | he6710b0_0 260 KB
pep8-1.7.1 | py27_0 51 KB
pexpect-4.7.0 | py27_0 80 KB
pickleshare-0.7.5 | py27_0 12 KB
pillow-6.2.0 | py27h34e0f95_0 642 KB
pip-19.2.3 | py27_0 1.9 MB
pixman-0.38.0 | h7b6447c_0 618 KB
pkginfo-1.5.0.1 | py27_0 41 KB
pluggy-0.13.0 | py27_0 31 KB
ply-3.11 | py27_0 79 KB
prometheus_client-0.7.1 | py_0 42 KB
prompt_toolkit-1.0.15 | py27_0 333 KB
psutil-5.6.3 | py27h7b6447c_0 321 KB
ptyprocess-0.6.0 | py27_0 22 KB
py-1.8.0 | py27_0 137 KB
py-lief-0.9.0 | py27h7725739_2 1.6 MB
pycairo-1.18.1 | py27h2a1e443_0 76 KB
pycodestyle-2.5.0 | py27_0 60 KB
pycosat-0.6.3 | py27h14c3975_0 103 KB
pycparser-2.19 | py27_0 173 KB
pycrypto-2.6.1 | py27h14c3975_9 460 KB
pycurl-7.43.0.3 | py27h1ba5d50_0 69 KB
pyflakes-2.1.1 | py27_0 100 KB
pygments-2.4.2 | py_0 664 KB
pylint-1.9.2 | py27_0 772 KB
pyodbc-4.0.27 | py27he6710b0_0 72 KB
pyopenssl-19.0.0 | py27_0 80 KB
pyparsing-2.4.2 | py_0 61 KB
pyqt-5.9.2 | py27h05f1152_2 5.4 MB
pyrsistent-0.15.4 | py27h7b6447c_0 90 KB
pysocks-1.7.1 | py27_0 30 KB
pytables-3.5.2 | py27h71ec239_1 1.4 MB
pytest-4.6.2 | py27_0 358 KB
python-2.7.16 | h9bab390_7 12.4 MB
python-dateutil-2.8.0 | py27_0 279 KB
python-libarchive-c-2.8 | py27_13 23 KB
pywavelets-1.0.3 | py27hdd07704_1 4.4 MB
pyyaml-5.1.2 | py27h7b6447c_0 178 KB
pyzmq-18.1.0 | py27he6710b0_0 467 KB
qt-5.9.7 | h5867ecd_1 85.9 MB
qtawesome-0.6.0 | py_0 671 KB
qtconsole-4.5.5 | py_0 94 KB
requests-2.22.0 | py27_0 89 KB
ripgrep-0.10.0 | hc07d326_0 1.4 MB
rope-0.14.0 | py_0 113 KB
ruamel_yaml-0.15.46 | py27h14c3975_0 241 KB
scandir-1.10.0 | py27h7b6447c_0 32 KB
scikit-image-0.14.2 | py27he6710b0_0 24.0 MB
scikit-learn-0.20.3 | py27hd81dba3_0 5.8 MB
scipy-1.2.1 | py27h7c811a0_0 17.6 MB
seaborn-0.9.0 | py27_0 374 KB
send2trash-1.5.0 | py27_0 16 KB
setuptools-41.4.0 | py27_0 640 KB
simplegeneric-0.8.1 | py27_2 9 KB
singledispatch-3.4.0.3 | py27_0 15 KB
sip-4.19.8 | py27hf484d3e_0 291 KB
six-1.12.0 | py27_0 22 KB
sortedcollections-1.1.2 | py27_0 17 KB
sortedcontainers-2.1.0 | py27_0 44 KB
soupsieve-1.9.3 | py27_0 59 KB
sphinx-1.8.5 | py27_0 1.9 MB
sphinxcontrib-1.0 | py27_1 3 KB
sphinxcontrib-websupport-1.1.2| py_0 35 KB
spyder-3.3.6 | py27_0 2.5 MB
spyder-kernels-0.5.2 | py27_0 69 KB
sqlalchemy-1.3.9 | py27h7b6447c_0 1.7 MB
sqlite-3.30.0 | h7b6447c_0 1.9 MB
ssl_match_hostname-3.7.0.1 | py27_0 13 KB
statsmodels-0.10.1 | py27hdd07704_0 9.6 MB
subprocess32-3.5.4 | py27h7b6447c_0 49 KB
sympy-1.4 | py27_0 9.9 MB
tbb-2019.4 | hfd86e86_0 1.4 MB
tblib-1.4.0 | py_0 14 KB
terminado-0.8.2 | py27_0 22 KB
testpath-0.4.2 | py27_0 91 KB
tornado-5.1.1 | py27h7b6447c_0 643 KB
tqdm-4.36.1 | py_0 50 KB
traceback2-1.4.0 | py27_0 30 KB
traitlets-4.3.3 | py27_0 132 KB
typing-3.7.4.1 | py27_0 50 KB
unicodecsv-0.14.1 | py27_0 24 KB
unittest2-1.1.0 | py27_0 143 KB
unixodbc-2.3.7 | h14c3975_0 319 KB
urllib3-1.24.2 | py27_0 151 KB
wcwidth-0.1.7 | py27_0 25 KB
webencodings-0.5.1 | py27_1 19 KB
werkzeug-0.16.0 | py_0 255 KB
wheel-0.33.6 | py27_0 40 KB
widgetsnbextension-3.5.1 | py27_0 1.8 MB
wrapt-1.11.2 | py27h7b6447c_0 48 KB
wurlitzer-1.0.3 | py27_0 14 KB
xlrd-1.2.0 | py27_0 187 KB
xlsxwriter-1.2.1 | py_0 106 KB
xlwt-1.3.0 | py27_0 160 KB
zeromq-4.3.1 | he6710b0_3 666 KB
zict-1.0.0 | py_0 12 KB
zipp-0.6.0 | py_0 9 KB
------------------------------------------------------------
Total: 595.8 MB
The following NEW packages will be INSTALLED:
_libgcc_mutex pkgs/main/linux-64::libgcc_mutex-0.1-main
alabaster pkgs/main/linux-64::alabaster-0.7.12-py27_0
anaconda pkgs/main/linux-64::anaconda-2019.10-py27_0
anaconda-client pkgs/main/linux-64::anaconda-client-1.7.2-py27_0
anaconda-project pkgs/main/noarch::anaconda-project-0.8.3-py_0
asn1crypto pkgs/main/linux-64::asn1crypto-1.0.1-py27_0
astroid pkgs/main/linux-64::astroid-1.6.5-py27_0
astropy pkgs/main/linux-64::astropy-2.0.9-py27hdd07704_0
atomicwrites pkgs/main/linux-64::atomicwrites-1.3.0-py27_1
attrs pkgs/main/noarch::attrs-19.2.0-py_0
babel pkgs/main/noarch::babel-2.7.0-py_0
backports pkgs/main/noarch::backports-1.0-py_2
backports.functoo~ pkgs/main/noarch::backports.functools_lru_cache-1.5-py_2
backports.os pkgs/main/linux-64::backports.os-0.1.1-py27_0
backports.shutil~ pkgs/main/linux-64::backports.shutil_get_terminal_size-1.0.0-py27_2
backports_abc pkgs/main/linux-64::backports_abc-0.5-py27_0
beautifulsoup4 pkgs/main/linux-64::beautifulsoup4-4.8.0-py27_0
bitarray pkgs/main/linux-64::bitarray-1.0.1-py27h7b6447c_0
bkcharts pkgs/main/linux-64::bkcharts-0.2-py27_0
blas pkgs/main/linux-64::blas-1.0-mkl
bleach pkgs/main/linux-64::bleach-3.1.0-py27_0
blosc pkgs/main/linux-64::blosc-1.16.3-hd408876_0
bokeh pkgs/main/linux-64::bokeh-1.3.4-py27_0
boto pkgs/main/linux-64::boto-2.49.0-py27_0
bottleneck pkgs/main/linux-64::bottleneck-1.2.1-py27h035aef0_1
bzip2 pkgs/main/linux-64::bzip2-1.0.8-h7b6447c_0
ca-certificates pkgs/main/linux-64::ca-certificates-2019.8.28-0
cairo pkgs/main/linux-64::cairo-1.14.12-h8948797_3
cdecimal pkgs/main/linux-64::cdecimal-2.3-py27h14c3975_3
certifi pkgs/main/linux-64::certifi-2019.9.11-py27_0
cffi pkgs/main/linux-64::cffi-1.12.3-py27h2e261b9_0
chardet pkgs/main/linux-64::chardet-3.0.4-py27_1003
click pkgs/main/linux-64::click-7.0-py27_0
cloudpickle pkgs/main/noarch::cloudpickle-1.2.2-py_0
clyent pkgs/main/linux-64::clyent-1.2.2-py27_1
colorama pkgs/main/linux-64::colorama-0.4.1-py27_0
configparser pkgs/main/linux-64::configparser-4.0.2-py27_0
contextlib2 pkgs/main/noarch::contextlib2-0.6.0-py_0
cryptography pkgs/main/linux-64::cryptography-2.7-py27h1ba5d50_0
curl pkgs/main/linux-64::curl-7.65.3-hbc83047_0
cycler pkgs/main/linux-64::cycler-0.10.0-py27_0
cython pkgs/main/linux-64::cython-0.29.13-py27he6710b0_0
cytoolz pkgs/main/linux-64::cytoolz-0.10.0-py27h7b6447c_0
dask pkgs/main/noarch::dask-1.2.2-py_0
dask-core pkgs/main/noarch::dask-core-1.2.2-py_0
dbus pkgs/main/linux-64::dbus-1.13.6-h746ee38_0
decorator pkgs/main/linux-64::decorator-4.4.0-py27_1
defusedxml pkgs/main/noarch::defusedxml-0.6.0-py_0
distributed pkgs/main/linux-64::distributed-1.28.1-py27_0
docutils pkgs/main/linux-64::docutils-0.15.2-py27_0
entrypoints pkgs/main/linux-64::entrypoints-0.3-py27_0
enum34 pkgs/main/linux-64::enum34-1.1.6-py27_1
et_xmlfile pkgs/main/linux-64::et_xmlfile-1.0.1-py27_0
expat pkgs/main/linux-64::expat-2.2.6-he6710b0_0
fastcache pkgs/main/linux-64::fastcache-1.1.0-py27h7b6447c_0
filelock pkgs/main/noarch::filelock-3.0.12-py_0
flask pkgs/main/noarch::flask-1.1.1-py_0
fontconfig pkgs/main/linux-64::fontconfig-2.13.0-h9420a91_0
freetype pkgs/main/linux-64::freetype-2.9.1-h8a8886c_1
fribidi pkgs/main/linux-64::fribidi-1.0.5-h7b6447c_0
funcsigs pkgs/main/linux-64::funcsigs-1.0.2-py27_0
functools32 pkgs/main/linux-64::functools32-3.2.3.2-py27_1
future pkgs/main/linux-64::future-0.17.1-py27_0
futures pkgs/main/linux-64::futures-3.3.0-py27_0
get_terminal_size pkgs/main/linux-64::get_terminal_size-1.0.0-haa9412d_0
gevent pkgs/main/linux-64::gevent-1.4.0-py27h7b6447c_0
glib pkgs/main/linux-64::glib-2.56.2-hd408876_0
glob2 pkgs/main/noarch::glob2-0.7-py_0
gmp pkgs/main/linux-64::gmp-6.1.2-h6c8ec71_1
gmpy2 pkgs/main/linux-64::gmpy2-2.0.8-py27h10f8cd9_2
graphite2 pkgs/main/linux-64::graphite2-1.3.13-h23475e2_0
greenlet pkgs/main/linux-64::greenlet-0.4.15-py27h7b6447c_0
grin pkgs/main/linux-64::grin-1.2.1-py27_4
gst-plugins-base pkgs/main/linux-64::gst-plugins-base-1.14.0-hbbd80ab_1
gstreamer pkgs/main/linux-64::gstreamer-1.14.0-hb453b48_1
h5py pkgs/main/linux-64::h5py-2.9.0-py27h7918eee_0
harfbuzz pkgs/main/linux-64::harfbuzz-1.8.8-hffaf4a1_0
hdf5 pkgs/main/linux-64::hdf5-1.10.4-hb1b8bf9_0
heapdict pkgs/main/noarch::heapdict-1.0.1-py_0
html5lib pkgs/main/linux-64::html5lib-1.0.1-py27_0
icu pkgs/main/linux-64::icu-58.2-h9c2bf20_1
idna pkgs/main/linux-64::idna-2.8-py27_0
imageio pkgs/main/linux-64::imageio-2.6.0-py27_0
imagesize pkgs/main/linux-64::imagesize-1.1.0-py27_0
importlib_metadata pkgs/main/linux-64::importlib_metadata-0.23-py27_0
intel-openmp pkgs/main/linux-64::intel-openmp-2019.4-243
ipaddress pkgs/main/linux-64::ipaddress-1.0.22-py27_0
ipykernel pkgs/main/linux-64::ipykernel-4.10.0-py27_0
ipython pkgs/main/linux-64::ipython-5.8.0-py27_0
ipython_genutils pkgs/main/linux-64::ipython_genutils-0.2.0-py27_0
ipywidgets pkgs/main/noarch::ipywidgets-7.5.1-py_0
isort pkgs/main/linux-64::isort-4.3.21-py27_0
itsdangerous pkgs/main/linux-64::itsdangerous-1.1.0-py27_0
jbig pkgs/main/linux-64::jbig-2.1-hdba287a_0
jdcal pkgs/main/noarch::jdcal-1.4.1-py_0
jedi pkgs/main/linux-64::jedi-0.15.1-py27_0
jinja2 pkgs/main/noarch::jinja2-2.10.3-py_0
jpeg pkgs/main/linux-64::jpeg-9b-h024ee3a_2
jsonschema pkgs/main/linux-64::jsonschema-3.0.2-py27_0
jupyter pkgs/main/linux-64::jupyter-1.0.0-py27_7
jupyter_client pkgs/main/linux-64::jupyter_client-5.3.3-py27_1
jupyter_console pkgs/main/linux-64::jupyter_console-5.2.0-py27_1
jupyter_core pkgs/main/noarch::jupyter_core-4.5.0-py_0
jupyterlab pkgs/main/linux-64::jupyterlab-0.33.11-py27_0
jupyterlab_launch~ pkgs/main/linux-64::jupyterlab_launcher-0.11.2-py27h28b3542_0
kiwisolver pkgs/main/linux-64::kiwisolver-1.1.0-py27he6710b0_0
krb5 pkgs/main/linux-64::krb5-1.16.1-h173b8e3_7
lazy-object-proxy pkgs/main/linux-64::lazy-object-proxy-1.4.2-py27h7b6447c_0
libarchive pkgs/main/linux-64::libarchive-3.3.3-h5d8350f_5
libcurl pkgs/main/linux-64::libcurl-7.65.3-h20c2e04_0
libedit pkgs/main/linux-64::libedit-3.1.20181209-hc058e9b_0
libffi pkgs/main/linux-64::libffi-3.2.1-hd88cf55_4
libgcc-ng pkgs/main/linux-64::libgcc-ng-9.1.0-hdf63c60_0
libgfortran-ng pkgs/main/linux-64::libgfortran-ng-7.3.0-hdf63c60_0
liblief pkgs/main/linux-64::liblief-0.9.0-h7725739_2
libpng pkgs/main/linux-64::libpng-1.6.37-hbc83047_0
libsodium pkgs/main/linux-64::libsodium-1.0.16-h1bed415_0
libssh2 pkgs/main/linux-64::libssh2-1.8.2-h1ba5d50_0
libstdcxx-ng pkgs/main/linux-64::libstdcxx-ng-9.1.0-hdf63c60_0
libtiff pkgs/main/linux-64::libtiff-4.0.10-h2733197_2
libtool pkgs/main/linux-64::libtool-2.4.6-h7b6447c_5
libuuid pkgs/main/linux-64::libuuid-1.0.3-h1bed415_2
libxcb pkgs/main/linux-64::libxcb-1.13-h1bed415_1
libxml2 pkgs/main/linux-64::libxml2-2.9.9-hea5a465_1
libxslt pkgs/main/linux-64::libxslt-1.1.33-h7d1a2b0_0
linecache2 pkgs/main/linux-64::linecache2-1.0.0-py27_0
llvmlite pkgs/main/linux-64::llvmlite-0.29.0-py27hd408876_0
locket pkgs/main/linux-64::locket-0.2.0-py27_1
lxml pkgs/main/linux-64::lxml-4.4.1-py27hefd8a0e_0
lz4-c pkgs/main/linux-64::lz4-c-1.8.1.2-h14c3975_0
lzo pkgs/main/linux-64::lzo-2.10-h49e0be7_2
markupsafe pkgs/main/linux-64::markupsafe-1.1.1-py27h7b6447c_0
matplotlib pkgs/main/linux-64::matplotlib-2.2.3-py27hb69df0a_0
mccabe pkgs/main/linux-64::mccabe-0.6.1-py27_1
mistune pkgs/main/linux-64::mistune-0.8.4-py27h7b6447c_0
mkl pkgs/main/linux-64::mkl-2019.4-243
mkl-service pkgs/main/linux-64::mkl-service-2.3.0-py27he904b0f_0
mkl_fft pkgs/main/linux-64::mkl_fft-1.0.14-py27ha843d7b_0
mkl_random pkgs/main/linux-64::mkl_random-1.1.0-py27hd6b4f25_0
mock pkgs/main/linux-64::mock-3.0.5-py27_0
more-itertools pkgs/main/linux-64::more-itertools-5.0.0-py27_0
mpc pkgs/main/linux-64::mpc-1.1.0-h10f8cd9_1
mpfr pkgs/main/linux-64::mpfr-4.0.1-hdf1c602_3
mpmath pkgs/main/linux-64::mpmath-1.1.0-py27_0
msgpack-python pkgs/main/linux-64::msgpack-python-0.6.1-py27hfd86e86_1
multipledispatch pkgs/main/linux-64::multipledispatch-0.6.0-py27_0
nbconvert pkgs/main/linux-64::nbconvert-5.6.0-py27_1
nbformat pkgs/main/linux-64::nbformat-4.4.0-py27_0
ncurses pkgs/main/linux-64::ncurses-6.1-he6710b0_1
networkx pkgs/main/linux-64::networkx-2.2-py27_1
nltk pkgs/main/linux-64::nltk-3.4.5-py27_0
nose pkgs/main/linux-64::nose-1.3.7-py27_2
notebook pkgs/main/linux-64::notebook-5.7.8-py27_0
numba pkgs/main/linux-64::numba-0.45.1-py27h962f231_0
numexpr pkgs/main/linux-64::numexpr-2.7.0-py27h9e4a6bb_0
numpy pkgs/main/linux-64::numpy-1.16.5-py27h7e9f1db_0
numpy-base pkgs/main/linux-64::numpy-base-1.16.5-py27hde5b4d6_0
numpydoc pkgs/main/noarch::numpydoc-0.9.1-py_0
olefile pkgs/main/linux-64::olefile-0.46-py27_0
openpyxl pkgs/main/noarch::openpyxl-2.6.3-py_0
openssl pkgs/main/linux-64::openssl-1.1.1d-h7b6447c_2
packaging pkgs/main/noarch::packaging-19.2-py_0
pandas pkgs/main/linux-64::pandas-0.24.2-py27he6710b0_0
pandoc pkgs/main/linux-64::pandoc-2.2.3.2-0
pandocfilters pkgs/main/linux-64::pandocfilters-1.4.2-py27_1
pango pkgs/main/linux-64::pango-1.42.4-h049681c_0
parso pkgs/main/noarch::parso-0.5.1-py_0
partd pkgs/main/noarch::partd-1.0.0-py_0
patchelf pkgs/main/linux-64::patchelf-0.9-he6710b0_3
path.py pkgs/main/linux-64::path.py-11.5.0-py27_0
pathlib2 pkgs/main/linux-64::pathlib2-2.3.5-py27_0
patsy pkgs/main/linux-64::patsy-0.5.1-py27_0
pcre pkgs/main/linux-64::pcre-8.43-he6710b0_0
pep8 pkgs/main/linux-64::pep8-1.7.1-py27_0
pexpect pkgs/main/linux-64::pexpect-4.7.0-py27_0
pickleshare pkgs/main/linux-64::pickleshare-0.7.5-py27_0
pillow pkgs/main/linux-64::pillow-6.2.0-py27h34e0f95_0
pip pkgs/main/linux-64::pip-19.2.3-py27_0
pixman pkgs/main/linux-64::pixman-0.38.0-h7b6447c_0
pkginfo pkgs/main/linux-64::pkginfo-1.5.0.1-py27_0
pluggy pkgs/main/linux-64::pluggy-0.13.0-py27_0
ply pkgs/main/linux-64::ply-3.11-py27_0
prometheus_client pkgs/main/noarch::prometheus_client-0.7.1-py_0
prompt_toolkit pkgs/main/linux-64::prompt_toolkit-1.0.15-py27_0
psutil pkgs/main/linux-64::psutil-5.6.3-py27h7b6447c_0
ptyprocess pkgs/main/linux-64::ptyprocess-0.6.0-py27_0
py pkgs/main/linux-64::py-1.8.0-py27_0
py-lief pkgs/main/linux-64::py-lief-0.9.0-py27h7725739_2
pycairo pkgs/main/linux-64::pycairo-1.18.1-py27h2a1e443_0
pycodestyle pkgs/main/linux-64::pycodestyle-2.5.0-py27_0
pycosat pkgs/main/linux-64::pycosat-0.6.3-py27h14c3975_0
pycparser pkgs/main/linux-64::pycparser-2.19-py27_0
pycrypto pkgs/main/linux-64::pycrypto-2.6.1-py27h14c3975_9
pycurl pkgs/main/linux-64::pycurl-7.43.0.3-py27h1ba5d50_0
pyflakes pkgs/main/linux-64::pyflakes-2.1.1-py27_0
pygments pkgs/main/noarch::pygments-2.4.2-py_0
pylint pkgs/main/linux-64::pylint-1.9.2-py27_0
pyodbc pkgs/main/linux-64::pyodbc-4.0.27-py27he6710b0_0
pyopenssl pkgs/main/linux-64::pyopenssl-19.0.0-py27_0
pyparsing pkgs/main/noarch::pyparsing-2.4.2-py_0
pyqt pkgs/main/linux-64::pyqt-5.9.2-py27h05f1152_2
pyrsistent pkgs/main/linux-64::pyrsistent-0.15.4-py27h7b6447c_0
pysocks pkgs/main/linux-64::pysocks-1.7.1-py27_0
pytables pkgs/main/linux-64::pytables-3.5.2-py27h71ec239_1
pytest pkgs/main/linux-64::pytest-4.6.2-py27_0
python pkgs/main/linux-64::python-2.7.16-h9bab390_7
python-dateutil pkgs/main/linux-64::python-dateutil-2.8.0-py27_0
python-libarchive~ pkgs/main/linux-64::python-libarchive-c-2.8-py27_13
pytz pkgs/main/noarch::pytz-2019.3-py_0
pywavelets pkgs/main/linux-64::pywavelets-1.0.3-py27hdd07704_1
pyyaml pkgs/main/linux-64::pyyaml-5.1.2-py27h7b6447c_0
pyzmq pkgs/main/linux-64::pyzmq-18.1.0-py27he6710b0_0
qt pkgs/main/linux-64::qt-5.9.7-h5867ecd_1
qtawesome pkgs/main/noarch::qtawesome-0.6.0-py_0
qtconsole pkgs/main/noarch::qtconsole-4.5.5-py_0
qtpy pkgs/main/noarch::qtpy-1.9.0-py_0
readline pkgs/main/linux-64::readline-7.0-h7b6447c_5
requests pkgs/main/linux-64::requests-2.22.0-py27_0
ripgrep pkgs/main/linux-64::ripgrep-0.10.0-hc07d326_0
rope pkgs/main/noarch::rope-0.14.0-py_0
ruamel_yaml pkgs/main/linux-64::ruamel_yaml-0.15.46-py27h14c3975_0
scandir pkgs/main/linux-64::scandir-1.10.0-py27h7b6447c_0
scikit-image pkgs/main/linux-64::scikit-image-0.14.2-py27he6710b0_0
scikit-learn pkgs/main/linux-64::scikit-learn-0.20.3-py27hd81dba3_0
scipy pkgs/main/linux-64::scipy-1.2.1-py27h7c811a0_0
seaborn pkgs/main/linux-64::seaborn-0.9.0-py27_0
send2trash pkgs/main/linux-64::send2trash-1.5.0-py27_0
setuptools pkgs/main/linux-64::setuptools-41.4.0-py27_0
simplegeneric pkgs/main/linux-64::simplegeneric-0.8.1-py27_2
singledispatch pkgs/main/linux-64::singledispatch-3.4.0.3-py27_0
sip pkgs/main/linux-64::sip-4.19.8-py27hf484d3e_0
six pkgs/main/linux-64::six-1.12.0-py27_0
snappy pkgs/main/linux-64::snappy-1.1.7-hbae5bb6_3
snowballstemmer pkgs/main/noarch::snowballstemmer-2.0.0-py_0
sortedcollections pkgs/main/linux-64::sortedcollections-1.1.2-py27_0
sortedcontainers pkgs/main/linux-64::sortedcontainers-2.1.0-py27_0
soupsieve pkgs/main/linux-64::soupsieve-1.9.3-py27_0
sphinx pkgs/main/linux-64::sphinx-1.8.5-py27_0
sphinxcontrib pkgs/main/linux-64::sphinxcontrib-1.0-py27_1
sphinxcontrib-web~ pkgs/main/noarch::sphinxcontrib-websupport-1.1.2-py_0
spyder pkgs/main/linux-64::spyder-3.3.6-py27_0
spyder-kernels pkgs/main/linux-64::spyder-kernels-0.5.2-py27_0
sqlalchemy pkgs/main/linux-64::sqlalchemy-1.3.9-py27h7b6447c_0
sqlite pkgs/main/linux-64::sqlite-3.30.0-h7b6447c_0
ssl_match_hostname pkgs/main/linux-64::ssl_match_hostname-3.7.0.1-py27_0
statsmodels pkgs/main/linux-64::statsmodels-0.10.1-py27hdd07704_0
subprocess32 pkgs/main/linux-64::subprocess32-3.5.4-py27h7b6447c_0
sympy pkgs/main/linux-64::sympy-1.4-py27_0
tbb pkgs/main/linux-64::tbb-2019.4-hfd86e86_0
tblib pkgs/main/noarch::tblib-1.4.0-py_0
terminado pkgs/main/linux-64::terminado-0.8.2-py27_0
testpath pkgs/main/linux-64::testpath-0.4.2-py27_0
tk pkgs/main/linux-64::tk-8.6.8-hbc83047_0
toolz pkgs/main/noarch::toolz-0.10.0-py_0
tornado pkgs/main/linux-64::tornado-5.1.1-py27h7b6447c_0
tqdm pkgs/main/noarch::tqdm-4.36.1-py_0
traceback2 pkgs/main/linux-64::traceback2-1.4.0-py27_0
traitlets pkgs/main/linux-64::traitlets-4.3.3-py27_0
typing pkgs/main/linux-64::typing-3.7.4.1-py27_0
unicodecsv pkgs/main/linux-64::unicodecsv-0.14.1-py27_0
unittest2 pkgs/main/linux-64::unittest2-1.1.0-py27_0
unixodbc pkgs/main/linux-64::unixodbc-2.3.7-h14c3975_0
urllib3 pkgs/main/linux-64::urllib3-1.24.2-py27_0
wcwidth pkgs/main/linux-64::wcwidth-0.1.7-py27_0
webencodings pkgs/main/linux-64::webencodings-0.5.1-py27_1
werkzeug pkgs/main/noarch::werkzeug-0.16.0-py_0
wheel pkgs/main/linux-64::wheel-0.33.6-py27_0
widgetsnbextension pkgs/main/linux-64::widgetsnbextension-3.5.1-py27_0
wrapt pkgs/main/linux-64::wrapt-1.11.2-py27h7b6447c_0
wurlitzer pkgs/main/linux-64::wurlitzer-1.0.3-py27_0
xlrd pkgs/main/linux-64::xlrd-1.2.0-py27_0
xlsxwriter pkgs/main/noarch::xlsxwriter-1.2.1-py_0
xlwt pkgs/main/linux-64::xlwt-1.3.0-py27_0
xz pkgs/main/linux-64::xz-5.2.4-h14c3975_4
yaml pkgs/main/linux-64::yaml-0.1.7-had09818_2
zeromq pkgs/main/linux-64::zeromq-4.3.1-he6710b0_3
zict pkgs/main/noarch::zict-1.0.0-py_0
zipp pkgs/main/noarch::zipp-0.6.0-py_0
zlib pkgs/main/linux-64::zlib-1.2.11-h7b6447c_3
zstd pkgs/main/linux-64::zstd-1.3.7-h0b5b093_0
Proceed ([y]/n)? y
Downloading and Extracting Packages
curl-7.65.3 | 141 KB | ############################################################################# | 100%
ptyprocess-0.6.0 | 22 KB | ############################################################################# | 100%
wrapt-1.11.2 | 48 KB | ############################################################################# | 100%
unixodbc-2.3.7 | 319 KB | ############################################################################# | 100%
anaconda-client-1.7. | 140 KB | ############################################################################# | 100%
spyder-3.3.6 | 2.5 MB | ############################################################################# | 100%
pycodestyle-2.5.0 | 60 KB | ############################################################################# | 100%
libuuid-1.0.3 | 16 KB | ############################################################################# | 100%
pexpect-4.7.0 | 80 KB | ############################################################################# | 100%
nbconvert-5.6.0 | 491 KB | ############################################################################# | 100%
astroid-1.6.5 | 402 KB | ############################################################################# | 100%
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pycrypto-2.6.1 | 460 KB | ############################################################################# | 100%
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simplegeneric-0.8.1 | 9 KB | ############################################################################# | 100%
icu-58.2 | 22.5 MB | ############################################################################# | 100%
ipywidgets-7.5.1 | 107 KB | ############################################################################# | 100%
scikit-learn-0.20.3 | 5.8 MB | ############################################################################# | 100%
llvmlite-0.29.0 | 17.7 MB | ############################################################################# | 100%
mpfr-4.0.1 | 575 KB | ############################################################################# | 100%
bleach-3.1.0 | 228 KB | ############################################################################# | 100%
traitlets-4.3.3 | 132 KB | ############################################################################# | 100%
soupsieve-1.9.3 | 59 KB | ############################################################################# | 100%
statsmodels-0.10.1 | 9.6 MB | ############################################################################# | 100%
libcurl-7.65.3 | 588 KB | ############################################################################# | 100%
jsonschema-3.0.2 | 89 KB | ############################################################################# | 100%
attrs-19.2.0 | 39 KB | ############################################################################# | 100%
imageio-2.6.0 | 3.3 MB | ############################################################################# | 100%
pyodbc-4.0.27 | 72 KB | ############################################################################# | 100%
ssl_match_hostname-3 | 13 KB | ############################################################################# | 100%
libtool-2.4.6 | 513 KB | ############################################################################# | 100%
click-7.0 | 116 KB | ############################################################################# | 100%
pip-19.2.3 | 1.9 MB | ############################################################################# | 100%
dask-1.2.2 | 11 KB | ############################################################################# | 100%
jupyter_console-5.2. | 35 KB | ############################################################################# | 100%
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ipaddress-1.0.22 | 32 KB | ############################################################################# | 100%
libsodium-1.0.16 | 302 KB | ############################################################################# | 100%
blosc-1.16.3 | 82 KB | ############################################################################# | 100%
sip-4.19.8 | 291 KB | ############################################################################# | 100%
python-dateutil-2.8. | 279 KB | ############################################################################# | 100%
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expat-2.2.6 | 187 KB | ############################################################################# | 100%
libxml2-2.9.9 | 2.0 MB | ############################################################################# | 100%
gstreamer-1.14.0 | 3.8 MB | ############################################################################# | 100%
webencodings-0.5.1 | 19 KB | ############################################################################# | 100%
greenlet-0.4.15 | 20 KB | ############################################################################# | 100%
idna-2.8 | 133 KB | ############################################################################# | 100%
terminado-0.8.2 | 22 KB | ############################################################################# | 100%
glib-2.56.2 | 5.0 MB | ############################################################################# | 100%
funcsigs-1.0.2 | 20 KB | ############################################################################# | 100%
setuptools-41.4.0 | 640 KB | ############################################################################# | 100%
tblib-1.4.0 | 14 KB | ############################################################################# | 100%
certifi-2019.9.11 | 154 KB | ############################################################################# | 100%
pep8-1.7.1 | 51 KB | ############################################################################# | 100%
bkcharts-0.2 | 124 KB | ############################################################################# | 100%
pandoc-2.2.3.2 | 20.8 MB | ############################################################################# | 100%
anaconda-2019.10 | 11 KB | ############################################################################# | 100%
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sqlite-3.30.0 | 1.9 MB | ############################################################################# | 100%
sqlalchemy-1.3.9 | 1.7 MB | ############################################################################# | 100%
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colorama-0.4.1 | 24 KB | ############################################################################# | 100%
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traceback2-1.4.0 | 30 KB | ############################################################################# | 100%
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pytables-3.5.2 | 1.4 MB | ############################################################################# | 100%
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send2trash-1.5.0 | 16 KB | ############################################################################# | 100%
cycler-0.10.0 | 13 KB | ############################################################################# | 100%
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cairo-1.14.12 | 1.3 MB | ############################################################################# | 100%
alabaster-0.7.12 | 17 KB | ############################################################################# | 100%
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liblief-0.9.0 | 4.4 MB | ############################################################################# | 100%
pyrsistent-0.15.4 | 90 KB | ############################################################################# | 100%
urllib3-1.24.2 | 151 KB | ############################################################################# | 100%
pycurl-7.43.0.3 | 69 KB | ############################################################################# | 100%
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cryptography-2.7 | 602 KB | ############################################################################# | 100%
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itsdangerous-1.1.0 | 26 KB | ############################################################################# | 100%
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msgpack-python-0.6.1 | 90 KB | ############################################################################# | 100%
openpyxl-2.6.3 | 158 KB | ############################################################################# | 100%
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nbformat-4.4.0 | 139 KB | ############################################################################# | 100%
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pycosat-0.6.3 | 103 KB | ############################################################################# | 100%
dbus-1.13.6 | 587 KB | ############################################################################# | 100%
boto-2.49.0 | 1.4 MB | ############################################################################# | 100%
html5lib-1.0.1 | 189 KB | ############################################################################# | 100%
numpy-base-1.16.5 | 4.3 MB | ############################################################################# | 100%
py-1.8.0 | 137 KB | ############################################################################# | 100%
unicodecsv-0.14.1 | 24 KB | ############################################################################# | 100%
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linecache2-1.0.0 | 24 KB | ############################################################################# | 100%
numba-0.45.1 | 3.0 MB | ############################################################################# | 100%
functools32-3.2.3.2 | 23 KB | ############################################################################# | 100%
mkl_random-1.1.0 | 332 KB | ############################################################################# | 100%
numpydoc-0.9.1 | 31 KB | ############################################################################# | 100%
dask-core-1.2.2 | 539 KB | ############################################################################# | 100%
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docutils-0.15.2 | 742 KB | ############################################################################# | 100%
libtiff-4.0.10 | 604 KB | ############################################################################# | 100%
pygments-2.4.2 | 664 KB | ############################################################################# | 100%
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babel-2.7.0 | 5.8 MB | ############################################################################# | 100%
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future-0.17.1 | 710 KB | ############################################################################# | 100%
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pyopenssl-19.0.0 | 80 KB | ############################################################################# | 100%
heapdict-1.0.1 | 9 KB | ############################################################################# | 100%
cython-0.29.13 | 2.2 MB | ############################################################################# | 100%
rope-0.14.0 | 113 KB | ############################################################################# | 100%
widgetsnbextension-3 | 1.8 MB | ############################################################################# | 100%
distributed-1.28.1 | 852 KB | ############################################################################# | 100%
libarchive-3.3.3 | 1.5 MB | ############################################################################# | 100%
ipykernel-4.10.0 | 145 KB | ############################################################################# | 100%
pyparsing-2.4.2 | 61 KB | ############################################################################# | 100%
grin-1.2.1 | 27 KB | ############################################################################# | 100%
pyqt-5.9.2 | 5.4 MB | ############################################################################# | 100%
jbig-2.1 | 41 KB | ############################################################################# | 100%
libssh2-1.8.2 | 250 KB | ############################################################################# | 100%
fastcache-1.1.0 | 31 KB | ############################################################################# | 100%
imagesize-1.1.0 | 9 KB | ############################################################################# | 100%
py-lief-0.9.0 | 1.6 MB | ############################################################################# | 100%
backports.functools_ | 9 KB | ############################################################################# | 100%
psutil-5.6.3 | 321 KB | ############################################################################# | 100%
entrypoints-0.3 | 12 KB | ############################################################################# | 100%
futures-3.3.0 | 28 KB | ############################################################################# | 100%
ruamel_yaml-0.15.46 | 241 KB | ############################################################################# | 100%
sortedcontainers-2.1 | 44 KB | ############################################################################# | 100%
sphinxcontrib-1.0 | 3 KB | ############################################################################# | 100%
requests-2.22.0 | 89 KB | ############################################################################# | 100%
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get_terminal_size-1. | 3 KB | ############################################################################# | 100%
partd-1.0.0 | 19 KB | ############################################################################# | 100%
notebook-5.7.8 | 7.2 MB | ############################################################################# | 100%
spyder-kernels-0.5.2 | 69 KB | ############################################################################# | 100%
fribidi-1.0.5 | 112 KB | ############################################################################# | 100%
lxml-4.4.1 | 1.5 MB | ############################################################################# | 100%
qtconsole-4.5.5 | 94 KB | ############################################################################# | 100%
python-2.7.16 | 12.4 MB | ############################################################################# | 100%
tqdm-4.36.1 | 50 KB | ############################################################################# | 100%
mkl-service-2.3.0 | 205 KB | ############################################################################# | 100%
sphinx-1.8.5 | 1.9 MB | ############################################################################# | 100%
bitarray-1.0.1 | 60 KB | ############################################################################# | 100%
sympy-1.4 | 9.9 MB | ############################################################################# | 100%
libxslt-1.1.33 | 577 KB | ############################################################################# | 100%
mkl_fft-1.0.14 | 164 KB | ############################################################################# | 100%
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testpath-0.4.2 | 91 KB | ############################################################################# | 100%
jupyterlab-0.33.11 | 10.0 MB | ############################################################################# | 100%
subprocess32-3.5.4 | 49 KB | ############################################################################# | 100%
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graphite2-1.3.13 | 101 KB | ############################################################################# | 100%
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pylint-1.9.2 | 772 KB | ############################################################################# | 100%
wheel-0.33.6 | 40 KB | ############################################################################# | 100%
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patchelf-0.9 | 71 KB | ############################################################################# | 100%
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nose-1.3.7 | 213 KB | ############################################################################# | 100%
clyent-1.2.2 | 18 KB | ############################################################################# | 100%
kiwisolver-1.1.0 | 91 KB | ############################################################################# | 100%
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matplotlib-2.2.3 | 6.5 MB | ############################################################################# | 100%
krb5-1.16.1 | 1.4 MB | ############################################################################# | 100%
gst-plugins-base-1.1 | 6.3 MB | ############################################################################# | 100%
zict-1.0.0 | 12 KB | ############################################################################# | 100%
fontconfig-2.13.0 | 291 KB | ############################################################################# | 100%
pyflakes-2.1.1 | 100 KB | ############################################################################# | 100%
prompt_toolkit-1.0.1 | 333 KB | ############################################################################# | 100%
pluggy-0.13.0 | 31 KB | ############################################################################# | 100%
astropy-2.0.9 | 6.8 MB | ############################################################################# | 100%
ca-certificates-2019 | 132 KB | ############################################################################# | 100%
tbb-2019.4 | 1.4 MB | ############################################################################# | 100%
locket-0.2.0 | 8 KB | ############################################################################# | 100%
networkx-2.2 | 2.0 MB | ############################################################################# | 100%
chardet-3.0.4 | 186 KB | ############################################################################# | 100%
unittest2-1.1.0 | 143 KB | ############################################################################# | 100%
pyyaml-5.1.2 | 178 KB | ############################################################################# | 100%
pickleshare-0.7.5 | 12 KB | ############################################################################# | 100%
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lazy-object-proxy-1. | 30 KB | ############################################################################# | 100%
pyzmq-18.1.0 | 467 KB | ############################################################################# | 100%
ipython-5.8.0 | 1.0 MB | ############################################################################# | 100%
scikit-image-0.14.2 | 24.0 MB | ############################################################################# | 100%
ncurses-6.1 | 958 KB | ############################################################################# | 100%
jinja2-2.10.3 | 95 KB | ############################################################################# | 100%
zeromq-4.3.1 | 666 KB | ############################################################################# | 100%
qt-5.9.7 | 85.9 MB | ############################################################################# | 100%
ipython_genutils-0.2 | 38 KB | ############################################################################# | 100%
Preparing transaction: done
Verifying transaction: done
Executing transaction: done
To activate this environment, use
$ conda activate gdcold
To deactivate an active environment, use
$ conda deactivate
(base) $ conda activate gdcold
(gdcold)$ pip install pydrive
DEPRECATION: Python 2.7 will reach the end of its life on January 1st, 2020. Please upgrade your Python as Python 2.7 won't be maintained after that date. A future version of pip will drop support for Python 2.7. More details about Python 2 support in pip, can be found at https://pip.pypa.io/en/latest/development/release-process/#python-2-support
Looking in indexes: https://pypi.org/simple, https://pypi.ngc.nvidia.com
Collecting pydrive
Downloading https://files.pythonhosted.org/packages/6b/2d/c8e052ba51099faee0bfe71d84f35bb1576e6910483cad46b840a122ca6c/PyDrive-1.3.1-py2-none-any.whl
Collecting oauth2client>=4.0.0 (from pydrive)
Downloading https://files.pythonhosted.org/packages/95/a9/4f25a14d23f0786b64875b91784607c2277eff25d48f915e39ff0cff505a/oauth2client-4.1.3-py2.py3-none-any.whl (98kB)
|████████████████████████████████| 102kB 10.6MB/s
Requirement already satisfied: PyYAML>=3.0 in ./anaconda3/envs/gdcold/lib/python2.7/site-packages (from pydrive) (5.1.2)
Collecting google-api-python-client>=1.2 (from pydrive)
Downloading https://files.pythonhosted.org/packages/83/fc/98045b8c5e0ba12929d423e9ff6b742951bb846707539b18f19b27c6ddc3/google_api_python_client-1.12.8-py2.py3-none-any.whl (61kB)
|████████████████████████████████| 71kB 20.9MB/s
Requirement already satisfied: six>=1.6.1 in ./.local/lib/python2.7/site-packages (from oauth2client>=4.0.0->pydrive) (1.14.0)
Collecting rsa>=3.1.4 (from oauth2client>=4.0.0->pydrive)
Downloading https://files.pythonhosted.org/packages/26/f8/8127fdda0294f044121d20aac7785feb810e159098447967a6103dedfb96/rsa-4.5-py2.py3-none-any.whl
Collecting httplib2>=0.9.1 (from oauth2client>=4.0.0->pydrive)
Downloading https://files.pythonhosted.org/packages/98/3f/0769a851fbb0ecc458260055da67d550d3015ebe6b8b861c79ad00147bb9/httplib2-0.18.1.tar.gz (262kB)
|████████████████████████████████| 266kB 11.7MB/s
Installing build dependencies ... done
Getting requirements to build wheel ... done
Preparing wheel metadata ... done
Collecting pyasn1>=0.1.7 (from oauth2client>=4.0.0->pydrive)
Downloading https://files.pythonhosted.org/packages/62/1e/a94a8d635fa3ce4cfc7f506003548d0a2447ae76fd5ca53932970fe3053f/pyasn1-0.4.8-py2.py3-none-any.whl (77kB)
|████████████████████████████████| 81kB 24.5MB/s
Collecting pyasn1-modules>=0.0.5 (from oauth2client>=4.0.0->pydrive)
Downloading https://files.pythonhosted.org/packages/95/de/214830a981892a3e286c3794f41ae67a4495df1108c3da8a9f62159b9a9d/pyasn1_modules-0.2.8-py2.py3-none-any.whl (155kB)
|████████████████████████████████| 163kB 13.8MB/s
Collecting google-auth>=1.16.0 (from google-api-python-client>=1.2->pydrive)
Downloading https://files.pythonhosted.org/packages/3e/fd/df1b3a59aca9537a187413651ad63b290d165559150a868a298fa837fe7b/google_auth-1.24.0-py2.py3-none-any.whl (114kB)
|████████████████████████████████| 122kB 14.0MB/s
Collecting uritemplate<4dev,>=3.0.0 (from google-api-python-client>=1.2->pydrive)
Downloading https://files.pythonhosted.org/packages/bf/0c/60d82c077998feb631608dca3cc1fe19ac074e772bf0c24cf409b977b815/uritemplate-3.0.1-py2.py3-none-any.whl
Collecting google-api-core<2dev,>=1.21.0 (from google-api-python-client>=1.2->pydrive)
Downloading https://files.pythonhosted.org/packages/0f/a4/bbaf2e49d2ddeba5f9532682838775cb63f23ca69594294fa9f717b64c8a/google_api_core-1.24.1-py2.py3-none-any.whl (92kB)
|████████████████████████████████| 92kB 19.6MB/s
Collecting google-auth-httplib2>=0.0.3 (from google-api-python-client>=1.2->pydrive)
Downloading https://files.pythonhosted.org/packages/bd/4e/992849016f8b0c27fb604aafd0a7a724db16128906197bd1245c6f18e6a1/google_auth_httplib2-0.0.4-py2.py3-none-any.whl
Collecting cachetools<5.0,>=2.0.0 (from google-auth>=1.16.0->google-api-python-client>=1.2->pydrive)
Downloading https://files.pythonhosted.org/packages/2f/a6/30b0a0bef12283e83e58c1d6e7b5aabc7acfc4110df81a4471655d33e704/cachetools-3.1.1-py2.py3-none-any.whl
Requirement already satisfied: setuptools>=40.3.0 in ./.local/lib/python2.7/site-packages (from google-auth>=1.16.0->google-api-python-client>=1.2->pydrive) (41.0.1)
Collecting googleapis-common-protos<2.0dev,>=1.6.0 (from google-api-core<2dev,>=1.21.0->google-api-python-client>=1.2->pydrive)
Downloading https://files.pythonhosted.org/packages/03/74/3956721ea1eb4bcf7502a311fdaa60b85bd751de4e57d1943afe9b334141/googleapis_common_protos-1.52.0-py2.py3-none-any.whl (100kB)
|████████████████████████████████| 102kB 17.7MB/s
Collecting protobuf>=3.12.0 (from google-api-core<2dev,>=1.21.0->google-api-python-client>=1.2->pydrive)
Downloading https://files.pythonhosted.org/packages/41/c8/649a298f247305010c57ef2fffd8416686fbdb9e8d3754393ab4ee64f8cf/protobuf-3.14.0-cp27-cp27mu-manylinux1_x86_64.whl (1.0MB)
|████████████████████████████████| 1.0MB 15.5MB/s
Requirement already satisfied: futures>=3.2.0; python_version < "3.2" in ./anaconda3/envs/gdcold/lib/python2.7/site-packages (from google-api-core<2dev,>=1.21.0->google-api-python-client>=1.2->pydrive) (3.3.0)
Requirement already satisfied: pytz in ./anaconda3/envs/gdcold/lib/python2.7/site-packages (from google-api-core<2dev,>=1.21.0->google-api-python-client>=1.2->pydrive) (2019.3)
Requirement already satisfied: requests<3.0.0dev,>=2.18.0 in ./.local/lib/python2.7/site-packages (from google-api-core<2dev,>=1.21.0->google-api-python-client>=1.2->pydrive) (2.22.0)
Requirement already satisfied: chardet<3.1.0,>=3.0.2 in ./.local/lib/python2.7/site-packages (from requests<3.0.0dev,>=2.18.0->google-api-core<2dev,>=1.21.0->google-api-python-client>=1.2->pydrive) (3.0.4)
Requirement already satisfied: idna<2.9,>=2.5 in ./.local/lib/python2.7/site-packages (from requests<3.0.0dev,>=2.18.0->google-api-core<2dev,>=1.21.0->google-api-python-client>=1.2->pydrive) (2.8)
Requirement already satisfied: urllib3!=1.25.0,!=1.25.1,<1.26,>=1.21.1 in ./.local/lib/python2.7/site-packages (from requests<3.0.0dev,>=2.18.0->google-api-core<2dev,>=1.21.0->google-api-python-client>=1.2->pydrive) (1.25.8)
Requirement already satisfied: certifi>=2017.4.17 in ./.local/lib/python2.7/site-packages (from requests<3.0.0dev,>=2.18.0->google-api-core<2dev,>=1.21.0->google-api-python-client>=1.2->pydrive) (2019.11.28)
Building wheels for collected packages: httplib2
Building wheel for httplib2 (PEP 517) ... done
Created wheel for httplib2: filename=httplib2-0.18.1-cp27-none-any.whl size=96687 sha256=90ed0b6ef9de7663f3f2d2939ea263018df06539a051c8444b0c4fc9beb0b0b5
Stored in directory: /tmp/pip-ephem-wheel-cache-il7CiK/wheels/9a/a8/c3/72684de9397a5633e21ba89911174fbc9eb0b1fb9005c6eaf0
Successfully built httplib2
Installing collected packages: pyasn1, rsa, httplib2, pyasn1-modules, oauth2client, cachetools, google-auth, uritemplate, protobuf, googleapis-common-protos, google-api-core, google-auth-httplib2, google-api-python-client, pydrive
Successfully installed cachetools-3.1.1 google-api-core-1.24.1 google-api-python-client-1.12.8 google-auth-1.24.0 google-auth-httplib2-0.0.4 googleapis-common-protos-1.52.0 httplib2-0.18.1 oauth2client-4.1.3 protobuf-3.14.0 pyasn1-0.4.8 pyasn1-modules-0.2.8 pydrive-1.3.1 rsa-4.5 uritemplate-3.0.1
(gdcold) $ pip install backoff
DEPRECATION: Python 2.7 will reach the end of its life on January 1st, 2020. Please upgrade your Python as Python 2.7 won't be maintained after that date. A future version of pip will drop support for Python 2.7. More details about Python 2 support in pip, can be found at https://pip.pypa.io/en/latest/development/release-process/#python-2-support
Looking in indexes: https://pypi.org/simple, https://pypi.ngc.nvidia.com
Collecting backoff
Downloading https://files.pythonhosted.org/packages/f0/32/c5dd4f4b0746e9ec05ace2a5045c1fc375ae67ee94355344ad6c7005fd87/backoff-1.10.0-py2.py3-none-any.whl
Installing collected packages: backoff
Successfully installed backoff-1.10.0
(gdcold) $ git clone https://github.com/ctberthiaume/gdcp.git
Cloning into 'gdcp'...
remote: Enumerating objects: 302, done.
remote: Total 302 (delta 0), reused 0 (delta 0), pack-reused 302
Receiving objects: 100% (302/302), 75.68 KiB | 0 bytes/s, done.
Resolving deltas: 100% (190/190), done.
Checking connectivity... done.
(gdcold) $ gdcp/gdcp
/usr/bin/env: ‘python2.7’: Argument list too long
KeyError: 'fileSize'
First experience with gdcp, not that encouraging.
$ gdcp list
My Drive 0AFsJul7qtkQnUk9PVA folder
My Drive/Backups 0B1sJul7qtkQnaHoyblFLSEFYZE0 folder
My Drive/Backup 0B1sJul7qtkQnUzE0Z3NPMzN2LTA folder
Traceback (most recent call last):
File "/home/f/local/bin/gdcp", line 1251, in <module>
main()
File "/home/f/local/bin/gdcp", line 1248, in main
cli()
File "/home/f/local/bin/gdcp", line 1194, in cli
args.func(args)
File "/home/f/local/bin/gdcp", line 1206, in cli_list
gdcp.list(ids=ids, json_flag=args.json, depth=args.depth)
File "/home/f/local/bin/gdcp", line 100, in list
f.list(json_flag=json_flag, depth=depth)
File "/home/f/local/bin/gdcp", line 394, in list
c.list(json_flag, depth-1, new_pre)
File "/home/f/local/bin/gdcp", line 396, in list
self.print_file(json_flag, predecessors)
File "/home/f/local/bin/gdcp", line 421, in print_file
line.append(self.metadata["fileSize"])
KeyError: 'fileSize'
Need to run "gdcp list" not just "gdcp" to see the URL for the autorization code
The setup text says this:
"Once you've created ~/.gdcp/client_secrets.json, run gdcp again to authorize access to your Google Drive. You should see something like ..."
I found that running gdcp without any parameters was not enough, I needed to add "list" before the URL was displayed. (Possibly list was the default operation in the past?)
ImportError: No module named apiclient.errors
Traceback (most recent call last):
File "$HOME/bin/gdcp", line 3, in
import apiclient.errors
ImportError: No module named apiclient.errors
Note: "$HOME/bin/gdcp" is where I place the binary.
This error occurs from time to time, and I haven't found any pattern when it happens yet. Is there any way to solve? Thanks!
Upload failure
Uploading 150GB from AWS to GDrive.
03/26/2015 01:40:26 AM INFO gdcp : Uploaded 100.00%. 9556358352 bytes in 13m0.00s (11.44MB/s)
03/26/2015 01:40:26 AM INFO gdcp : Calculating MD5 checksum for sequences/khmer_qc/SA_s13_150m_1_2_201408280810/SA_s13_150m_1_2.fasta.gz.keep.abundfilt
03/26/2015 01:40:56 AM INFO gdcp : MD5 OK. f86d7afe5eaaa89b8dca9ad00c2f83cc (local) == f86d7afe5eaaa89b8dca9ad00c2f83cc
03/26/2015 01:40:57 AM INFO gdcp : Uploading sequences/khmer_qc/SA_s13_150m_1_2_201408280810/SA_s13_150m_1_2.fasta.gz.keep.abundfilt.below, mimeType=application/octet-stream
03/26/2015 01:43:20 AM INFO gdcp : Uploaded 6.22% (3.67MB/s)
03/26/2015 01:43:51 AM INFO gdcp : Uploaded 12.43% (6.03MB/s)
03/26/2015 01:44:19 AM INFO gdcp : Uploaded 18.65% (7.79MB/s)
Traceback (most recent call last):
File "/usr/local/bin/gdcp", line 1021, in <module>
main()
File "/usr/local/bin/gdcp", line 40, in main
cli()
File "/usr/local/bin/gdcp", line 912, in cli
args.func(args)
File "/usr/local/bin/gdcp", line 977, in cli_upload_file
not args.no_checksum)
File "/usr/local/bin/gdcp", line 594, in upload_folder
drive, subdir, parent_id=folder_id, checksum=checksum)
File "/usr/local/bin/gdcp", line 594, in upload_folder
drive, subdir, parent_id=folder_id, checksum=checksum)
File "/usr/local/bin/gdcp", line 589, in upload_folder
drive, onefile, parent_id=folder_id, checksum=checksum)
File "/usr/local/bin/gdcp", line 424, in upload_file
status, response = request.next_chunk()
File "/usr/local/lib/python2.7/dist-packages/oauth2client/util.py", line 135, in positional_wrapper
return wrapped(*args, **kwargs)
File "/usr/local/lib/python2.7/dist-packages/googleapiclient/http.py", line 867, in next_chunk
headers=headers)
File "/usr/local/lib/python2.7/dist-packages/oauth2client/util.py", line 135, in positional_wrapper
return wrapped(*args, **kwargs)
File "/usr/local/lib/python2.7/dist-packages/oauth2client/client.py", line 547, in new_request
redirections, connection_type)
File "/usr/local/lib/python2.7/dist-packages/httplib2/__init__.py", line 1593, in request
(response, content) = self._request(conn, authority, uri, request_uri, method, body, headers, redirections, cachekey)
File "/usr/local/lib/python2.7/dist-packages/httplib2/__init__.py", line 1335, in _request
(response, content) = self._conn_request(conn, request_uri, method, body, headers)
File "/usr/local/lib/python2.7/dist-packages/httplib2/__init__.py", line 1291, in _conn_request
response = conn.getresponse()
File "/usr/lib/python2.7/httplib.py", line 1045, in getresponse
response.begin()
File "/usr/lib/python2.7/httplib.py", line 409, in begin
version, status, reason = self._read_status()
File "/usr/lib/python2.7/httplib.py", line 373, in _read_status
raise BadStatusLine(line)
httplib.BadStatusLine: ''
Access token refresh failed
$ gdcp upload -p 'XXX' path/to/file
Traceback (most recent call last):
File "/share/apps/bin/gdcp", line 1267, in <module>
main()
File "/share/apps/bin/gdcp", line 1264, in main
cli()
File "/share/apps/bin/gdcp", line 1209, in cli
args.drive = create_GoogleDrive() # add GoogleDrive
File "/share/apps/bin/gdcp", line 724, in create_GoogleDrive
return GoogleDrive(authorize())
File "/share/apps/bin/gdcp", line 719, in authorize
gauth.CommandLineAuth()
File "/share/apps/python2.7/lib/python2.7/site-packages/pydrive/auth.py", line 74, in _decorated
self.Refresh()
File "/share/apps/python2.7/lib/python2.7/site-packages/pydrive/auth.py", line 376, in Refresh
raise RefreshError('Access token refresh failed: %s' % error)
pydrive.auth.RefreshError: Access token refresh failed: invalid_grant
Workaround was to set aside credentials.json.
Is there a version of gdcp that will run with Python 2.6.6 ?
Hi there,
I know this is not really an issue, and the doco clearly says that this needs Python 2.7. Unfortunately the shared server I work on is Python 2.6.6 and I have no control over updating it. Are there any versions of gdcp that will run on that version of Python?
Thanks in advance.
Downloading file will overwrite existing file of same name
What do you think? Is this unacceptable behavior, or user beware?
Maybe why resumable uploads not working?
Is it possible that resumable uploads aren't working because you never try the resume the upload?
In the following code (around line 438), you increment the resumable_retries, but I don't see that you actually retry anything. I'm probably just not understanding what you are doing, but it would be funny if this was the cause!
else:
delay = 2 ** resumable_retries
log.warning("HTTP error %d, retrying in %ds ..." %
(e.resp.status, delay))
time.sleep(delay)
resumable_retries += 1
Delete Files / Folders remotely
Hey,
it would be great if you could also add the deletion of Files and Folders.
Thanks for this handy tool!
UnboundLocalError: local variable 'output' referenced before assignment
100.00% 535503 0.50MB/s 1.08s MD5...Traceback (most recent call last):
File "/usr/bin/gdcp", line 1331, in
main()
File "/usr/bin/gdcp", line 1328, in main
cli()
File "/usr/bin/gdcp", line 1274, in cli
args.func(args)
File "/usr/bin/gdcp", line 1305, in cli_upload
checksum=not args.no_checksum)
File "/usr/bin/gdcp", line 90, in upload
f.upload()
File "/usr/bin/gdcp", line 286, in upload
self._check_md5()
File "/usr/bin/gdcp", line 656, in _check_md5
output.rstrip())
UnboundLocalError: local variable 'output' referenced before assignment
Doesn't work for me. Errors...
After running gdcp, I get:
File "/home/phoenix/bin/gdcp", line 146
except OSError, IOError:
^
SyntaxError: invalid syntax
After correcting line 146 to:
"except (OSError, IOError) as e:"
I get:
File "/home/phoenix/bin/gdcp", line 434
print json.dumps(self.metadata)
^
SyntaxError: invalid syntax
id parsing
This didn't work:
gdcp download -i https://docs.google.com/a/uw.edu/file/d/0B1vFU7eD_alGaXRiMk1qa1J6UzQ/edit?usp=drivesdk ./
Does work:
gdcp download -i 0B1vFU7eD_alGaXRiMk1qa1J6UzQ ./
missing file crash
gdcp doesn't like it when you delete a file out from underneath it.
This may best be filed under "won't fix".
This time it failed while checking the checksum, but I'm sure it would have been ugly during the upload too.
01/23/2015 08:11:18 PM INFO gdcp : Uploading /Old_3TB/Cedar/xtandem/7_protein/P1F3D2000.proph_FVAL_4.png, mimeType=image/png
01/23/2015 08:11:19 PM INFO gdcp : Uploaded 100.00%. 2875 bytes in 1.12s (0.00MB/s)
01/23/2015 08:11:19 PM INFO gdcp : Calculating MD5 checksum for /Old_3TB/Cedar/xtandem/7_protein/P1F3D2000.proph_FVAL_4.png
Traceback (most recent call last):
File "/usr/local/bin/gdcp", line 998, in <module>
main()
File "/usr/local/bin/gdcp", line 39, in main
cli()
File "/usr/local/bin/gdcp", line 889, in cli
args.func(args)
File "/usr/local/bin/gdcp", line 954, in cli_upload_file
not args.no_checksum)
File "/usr/local/bin/gdcp", line 571, in upload_folder
drive, subdir, parent_id=folder_id, checksum=checksum)
File "/usr/local/bin/gdcp", line 571, in upload_folder
drive, subdir, parent_id=folder_id, checksum=checksum)
File "/usr/local/bin/gdcp", line 571, in upload_folder
drive, subdir, parent_id=folder_id, checksum=checksum)
File "/usr/local/bin/gdcp", line 566, in upload_folder
drive, onefile, parent_id=folder_id, checksum=checksum)
File "/usr/local/bin/gdcp", line 537, in upload_file
if not check_md5(file_path, response["md5Checksum"]):
File "/usr/local/bin/gdcp", line 634, in check_md5
output.rstrip())
UnboundLocalError: local variable 'output' referenced before assignment
Trouble installing
OSX 10.10.4. Could there be an undocumented gdcp prerequisite?
cmckay$ which python
/opt/local/bin/python
sudo pip install --upgrade pydrive
[snip]
sudo pip install --upgrade backoff
[snip]
cmckay$ gdcp
Traceback (most recent call last):
File "/usr/local/bin/gdcp", line 3, in <module>
import apiclient.errors
ImportError: No module named apiclient.errors
gdcp bombs out with an error when asked to upload a socket
Stack trace below. The file is a socket indeed.
The problem is not so much that gdcp failed on copying a socket (what does it mean to upload a socket to Drive anyways?), but that it stopped an upload that has been going on for days now, without an obvious way to resume.
When uploading to Drive, you have to start assuming that people will want to upload huge disks if they have the quota on Drive, and through very narrow pipes. This means that uploads will extend for days (mine would be over in ~90 days assuming that a full 1Mbit/s upload is saturated, which it is not!)
When upload times measure in months, the odds of something happening that will stop the upload are not negligible. A good upload program must be robust in face of this, and must be defensive faced with the real possibility that a resume would be needed.
It seems to be an easy fix to exclude sockets (e.g. line 172 from the stack trace), but I think that the brittleness of upload may be a more significant problem here.
(...snip...)
srwxrwxrwx 1 root root 1 Mar 13 2011 /mnt/backup/2015-05-05/home/filip/.gdesklets/sockets/%3A1004.0
/mnt/backup/2015-05-05/home/filip/.gdesklets/sockets/
Traceback (most recent call last):
File "/home/f/local/bin/gdcp", line 1251, in <module>
def cli_version(args):
File "/home/f/local/bin/gdcp", line 1248, in main
log.info("Transferred ownership for %i file(s)" % len(gdcp.files))
File "/home/f/local/bin/gdcp", line 1194, in cli
parser_transfer.set_defaults(func=cli_transfer_ownership)
File "/home/f/local/bin/gdcp", line 1225, in cli_upload
gdcp.print_failed()
File "/home/f/local/bin/gdcp", line 86, in upload
f.upload()
File "/home/f/local/bin/gdcp", line 172, in upload
allfiles = [x for x in allfiles if not os.path.islink(x)]
File "/home/f/local/bin/gdcp", line 86, in upload
f.upload()
File "/home/f/local/bin/gdcp", line 172, in upload
allfiles = [x for x in allfiles if not os.path.islink(x)]
File "/home/f/local/bin/gdcp", line 86, in upload
f.upload()
File "/home/f/local/bin/gdcp", line 172, in upload
allfiles = [x for x in allfiles if not os.path.islink(x)]
File "/home/f/local/bin/gdcp", line 86, in upload
f.upload()
File "/home/f/local/bin/gdcp", line 172, in upload
allfiles = [x for x in allfiles if not os.path.islink(x)]
File "/home/f/local/bin/gdcp", line 86, in upload
f.upload()
File "/home/f/local/bin/gdcp", line 172, in upload
allfiles = [x for x in allfiles if not os.path.islink(x)]
File "/home/f/local/bin/gdcp", line 86, in upload
f.upload()
File "/home/f/local/bin/gdcp", line 175, in upload
# File
File "/home/f/local/bin/gdcp", line 583, in _create_media_body
# Folders are special google apps docs which we consider separately
File "/usr/local/lib/python2.7/dist-packages/oauth2client/util.py", line 142, in positional_wrapper
return wrapped(*args, **kwargs)
File "/usr/local/lib/python2.7/dist-packages/googleapiclient/http.py", line 426, in __init__
fd = open(self._filename, 'rb')
IOError: [Errno 6] No such device or address: '/mnt/backup/2015-05-05/home/filip/.gdesklets/sockets/%3A1004.0'
Authentication error
This is what I get after going through the credentials process. Not quite sure what is going on yet. This is on a OS X 10.10 machine with stock python build: Python 2.7.6 (default, Sep 9 2014, 15:04:36)
- Visit https://console.developers.google.com/
- Create a new project and select it
- Under 'APIs' make sure the 'Drive API' is turned on
- Under 'Credentials' create a new OAuth client ID
Choose 'Installed -> Other' for application type
- Click 'Download JSON' to download the secrets file
- Copy the secrets file to /Users/cedar/.gdcp/client_secrets.json
sagan:~ cedar$ cp /Users/cedar/Downloads/client_secret_801904155613-1dqbs3tls262a173gapslqed3q5h75pk.apps.googleusercontent.com.json /Users/cedar/.gdcp/client_secrets.json
sagan:~ cedar$ gdcp -h
Traceback (most recent call last):
File "/usr/local/bin/gdcp", line 1021, in <module>
main()
File "/usr/local/bin/gdcp", line 39, in main
do_setup()
File "/usr/local/bin/gdcp", line 127, in do_setup
authorize()
File "/usr/local/bin/gdcp", line 86, in authorize
gauth.CommandLineAuth()
File "/Library/Python/2.7/site-packages/pydrive/auth.py", line 69, in _decorated
code = decoratee(self, *args, **kwargs)
File "/Library/Python/2.7/site-packages/pydrive/auth.py", line 198, in CommandLineAuth
authorize_url = self.GetAuthUrl()
File "/Library/Python/2.7/site-packages/pydrive/auth.py", line 385, in GetAuthUrl
return self.flow.step1_get_authorize_url()
File "/Library/Python/2.7/site-packages/oauth2client/util.py", line 135, in positional_wrapper
return wrapped(*args, **kwargs)
File "/Library/Python/2.7/site-packages/oauth2client/client.py", line 1823, in step1_get_authorize_url
return _update_query_params(self.auth_uri, query_params)
File "/Library/Python/2.7/site-packages/oauth2client/client.py", line 431, in _update_query_params
parts = urllib.parse.urlparse(uri)
AttributeError: 'Module_six_moves_urllib_parse' object has no attribute 'urlparse'
is this project still supported?
install problem
Haven't had time to troubleshoot at all, so perhaps a problem on my end. This is on a pretty vanilla OS X 10.10 system with system python.
Sagan:Downloads cedar$ pip install pydrive --upgrade
Requirement already up-to-date: pydrive in /Library/Python/2.7/site-packages
Requirement already up-to-date: google-api-python-client>=1.2 in /Library/Python/2.7/site-packages (from pydrive)
Requirement already up-to-date: PyYAML>=3.0 in /Library/Python/2.7/site-packages (from pydrive)
Requirement already up-to-date: httplib2>=0.8 in /Library/Python/2.7/site-packages (from google-api-python-client>=1.2->pydrive)
Requirement already up-to-date: oauth2client>=1.4.6 in /Library/Python/2.7/site-packages (from google-api-python-client>=1.2->pydrive)
Requirement already up-to-date: six>=1.6.1 in /Library/Python/2.7/site-packages (from google-api-python-client>=1.2->pydrive)
Requirement already up-to-date: uritemplate>=0.6 in /Library/Python/2.7/site-packages (from google-api-python-client>=1.2->pydrive)
Requirement already up-to-date: pyasn1==0.1.7 in /Library/Python/2.7/site-packages (from oauth2client>=1.4.6->google-api-python-client>=1.2->pydrive)
Requirement already up-to-date: pyasn1-modules==0.0.5 in /Library/Python/2.7/site-packages (from oauth2client>=1.4.6->google-api-python-client>=1.2->pydrive)
Requirement already up-to-date: rsa==3.1.4 in /Library/Python/2.7/site-packages (from oauth2client>=1.4.6->google-api-python-client>=1.2->pydrive)
Requirement already up-to-date: simplejson>=2.5.0 in /Library/Python/2.7/site-packages (from uritemplate>=0.6->google-api-python-client>=1.2->pydrive)
Sagan:Downloads cedar$ git clone https://github.com/ctberthiaume/gdcp.git
Cloning into 'gdcp'...
remote: Counting objects: 132, done.
remote: Total 132 (delta 0), reused 0 (delta 0), pack-reused 132
Receiving objects: 100% (132/132), 31.82 KiB | 0 bytes/s, done.
Resolving deltas: 100% (80/80), done.
Checking connectivity... done.
Sagan:Downloads cedar$ gdcp/gdcp
Traceback (most recent call last):
File "gdcp/gdcp", line 1021, in <module>
main()
File "gdcp/gdcp", line 39, in main
do_setup()
File "gdcp/gdcp", line 127, in do_setup
authorize()
File "gdcp/gdcp", line 86, in authorize
gauth.CommandLineAuth()
File "/Library/Python/2.7/site-packages/pydrive/auth.py", line 69, in _decorated
code = decoratee(self, *args, **kwargs)
File "/Library/Python/2.7/site-packages/pydrive/auth.py", line 198, in CommandLineAuth
authorize_url = self.GetAuthUrl()
File "/Library/Python/2.7/site-packages/pydrive/auth.py", line 385, in GetAuthUrl
return self.flow.step1_get_authorize_url()
File "/Library/Python/2.7/site-packages/oauth2client/util.py", line 137, in positional_wrapper
return wrapped(*args, **kwargs)
File "/Library/Python/2.7/site-packages/oauth2client/client.py", line 1827, in step1_get_authorize_url
return _update_query_params(self.auth_uri, query_params)
File "/Library/Python/2.7/site-packages/oauth2client/client.py", line 435, in _update_query_params
parts = urllib.parse.urlparse(uri)
AttributeError: 'Module_six_moves_urllib_parse' object has no attribute 'urlparse'
ID parsing issue?
This works:
gdcp download -i 0B__fjS2wOAmmSGxpMDhMSWtCaFU ./
This does not:
gdcp download -i 'https://drive.google.com/open?id=0B__fjS2wOAmmSGxpMDhMSWtCaFU' ./
Traceback (most recent call last):
File "/usr/local/bin/gdcp", line 1227, in <module>
main()
File "/usr/local/bin/gdcp", line 1224, in main
cli()
File "/usr/local/bin/gdcp", line 1168, in cli
args.func(args)
File "/usr/local/bin/gdcp", line 1186, in cli_download
gdcp.download(ids=ids, checksum=not args.no_checksum, root=args.target)
File "/usr/local/bin/gdcp", line 87, in download
f.download()
File "/usr/local/bin/gdcp", line 271, in download
self._ensure_google_file_metadata()
File "/usr/local/bin/gdcp", line 517, in _ensure_google_file_metadata
response = execute_request(request)
File "/usr/local/lib/python2.7/dist-packages/backoff.py", line 271, in retry
ret = target(*args, **kwargs)
File "/usr/local/lib/python2.7/dist-packages/backoff.py", line 271, in retry
ret = target(*args, **kwargs)
File "/usr/local/lib/python2.7/dist-packages/backoff.py", line 271, in retry
ret = target(*args, **kwargs)
File "/usr/local/bin/gdcp", line 760, in execute_request
return request.execute()
File "/usr/local/lib/python2.7/dist-packages/oauth2client/util.py", line 137, in positional_wrapper
return wrapped(*args, **kwargs)
File "/usr/local/lib/python2.7/dist-packages/googleapiclient/http.py", line 729, in execute
raise HttpError(resp, content, uri=self.uri)
googleapiclient.errors.HttpError: <HttpError 404 when requesting https://www.googleapis.com/drive/v2/files/open%3Fid%3D0B__fjS2wOAmmSGxpMDhMSWtCaFU?alt=json returned "File not found: open?id=0B__fjS2wOAmmSGxpMDhMSWtCaFU">
gdcp on sierra?
Following the install instructions in the README didn't yield a working install.
$ gdcp
Traceback (most recent call last):
File "/usr/local/bin/gdcp", line 16, in <module>
from pydrive.auth import GoogleAuth
File "/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pydrive/auth.py", line 15, in <module>
from oauth2client.file import CredentialsFileSymbolicLinkError
ImportError: cannot import name CredentialsFileSymbolicLinkError
$ pip search oauth2client
courseraoauth2client (0.0.1) - An OAuth2 client for the Coursera App Platform.
oauth2client (4.0.0) - OAuth 2.0 client library
INSTALLED: 4.0.0 (latest)
sudo port install -f py27-oauth2client
[snip]
$ gdcp
usage: gdcp [-h] {version,list,download,upload,transfer} ...
accept alternate config/authentication directories from command line
This should be pretty easy, and handy for my use case.
problem parsing object id from url
This does not work:
gdcp download -i 'https://drive.google.com/a/uw.edu/file/d/xxxxFU7eD_alGd1JnQ0U2YmNKanc/view?usp=drivesdk' ./
This does:
gdcp download -i 'https://drive.google.com/a/uw.edu/file/d/xxxxFU7eD_alGd1JnQ0U2YmNKanc' ./
(removed /view?usp=drivesdk from end of url)
error 502 / resumable progress problem
01/17/2015 02:20:11 PM INFO gdcp : Uploading /Old_3TB/Cedar/yang's cp_working/bol1/bol1/phd_dir/bol1f1_fp03q356.x1.phd.1, mimeType=application/octet-stream
01/17/2015 02:20:33 PM WARNING gdcp : HTTP error 502, retrying in 1s ...
Traceback (most recent call last):
File "/usr/local/bin/gdcp", line 941, in <module>
main()
File "/usr/local/bin/gdcp", line 38, in main
cli()
File "/usr/local/bin/gdcp", line 832, in cli
args.func(args)
File "/usr/local/bin/gdcp", line 897, in cli_upload_file
not args.no_checksum)
File "/usr/local/bin/gdcp", line 514, in upload_folder
drive, subdir, parent_id=folder_id, checksum=checksum)
File "/usr/local/bin/gdcp", line 514, in upload_folder
drive, subdir, parent_id=folder_id, checksum=checksum)
File "/usr/local/bin/gdcp", line 514, in upload_folder
drive, subdir, parent_id=folder_id, checksum=checksum)
File "/usr/local/bin/gdcp", line 514, in upload_folder
drive, subdir, parent_id=folder_id, checksum=checksum)
File "/usr/local/bin/gdcp", line 514, in upload_folder
drive, subdir, parent_id=folder_id, checksum=checksum)
File "/usr/local/bin/gdcp", line 509, in upload_folder
drive, onefile, parent_id=folder_id, checksum=checksum)
File "/usr/local/bin/gdcp", line 374, in upload_file
status, response = request.next_chunk()
File "/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/oauth2client/util.py", line 135, in positional_wrapper
return wrapped(*args, **kwargs)
File "/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/googleapiclient/http.py", line 819, in next_chunk
status, body = self._process_response(resp, content)
File "/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/googleapiclient/http.py", line 896, in _process_response
self.resumable_progress = int(resp['range'].split('-')[1]) + 1
KeyError: 'range'
No module named apiclient.errors
import apiclient.errors
ImportError: No module named apiclient.errors
This is the error I get, when I run gdcp using following code:=> ~/bin/gdcp
when I look into gdcp content it is like:-
#!/usr/bin/env python2.7
import apiclient.errors
import apiclient.http
from argparse import ArgumentDefaultsHelpFormatter
from argparse import ArgumentParser
and the issue is in the line: import apiclient.errors
Please feel free to ask any further query to understand the issue.
note: I am using it to connect google drive to a remote ssh server linux machine.
Preserve some metadata?
It would be nice to preserve creation and modification dates of files we upload and download. Think it is a worthwhile enhancement?
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