darisallc / visible

Visible Build Notes: Currently tested on M1.

1. Visible has the following dependencies: Boost (Homebrew) OpenCv (Homebrew) sodlog (Homebrew) OpenImageIO (Homebrew) ffmpeg (Homebrew) gsl (Homebrew) fmt (Homebrew) Cinder (git submodule github/com/gmnamra/Cinder.git branch v0.9.3_imgui_87) ImGui (embedded in Cinder above )

2. To build: at the moment this is a manual step brew install dependencies git clone --recursive Visible repo build Cinder build Visible

Next Steps for build: 1. Build script 2. cmake

Visible implements "Method and apparatus for acquisition, compression, and characterization of spatiotemporal signals"

Covered by U.S. Patents 9,001,884 and 7,672,369 and Patents in EU and Japan.

visible's Issues

Ap Store Issue

https://appstoreconnect.apple.com/WebObjects/iTunesConnect.woa/ra/ng/app/1218639377/platform/osx/versions/821455744/resolutioncenter

App Store build does not launch VisibleRun

To create:

1. Start Visible
2. Drop a LIF file
3. Select one of the Series
4. No VisibleRun is launched

Add support for exporting contraction results

Add support for exporting contraction results in lifContext

OpenCv usage in projects

Cleanup usage of OpenCv3 install location in all projects

cleanup svl local ( use external )

bug-reporting

Add threading support in similarity computation

Add progress callback and yield for seamless operation with the GUI

Visible lifContext

Display cell/tissue position on all channels.

Plot Data at the end looks incorrect

Loading into lif_algo needed protection from concurrent thread access.
09c1384

quit via menu on Visible App

sscli

Sscli is broken
Build settings etc /

full screen in Visible

Crashes. Build 391

roiWindow refactored to use cv::Mat as root

Cv::Mat is a ref counted object.
With this enhancement, we remove copies for using OpenCv and reduce the time to prototype using OpenCv functionality.