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A flexible framework for rapid genome analysis and interpretation
SQLCipher is an SQLite extension that provides 256 bit AES encryption of database files.
SQUID detects both fusion-gene and non-fusion-gene structural variations from RNA-seq data
SRA Tools
SRAToolkit has been REPLACED - see README
Running BLAST on local file system: XSEDE-Stampede
RNA-seq aligner
Tutorial for STAR-Fusion, FusionInspector, and de novo reconstruction of fusion transcripts using Trinity
The web page of the Statistical Genetics Lab (ESALQ/USP)
Code of structural entropy minimisation for TAD identification of Hic matrix
10x Genomics Linked-Read Diploid De Novo Assembler
The SuperPuTTY Window Manager for putty sessions
:cyclone: Learn R, in R.
:mortar_board: A collection of interactive courses for the swirl R package.
Preprocessing software for prepping Cufflinks output for Ballgown
TADbit is a complete Python library to deal with all steps to analyze, model and explore 3C-based data. With TADbit the user can map FASTQ files to obtain raw interaction binned matrices (Hi-C like matrices), normalize and correct interaction matrices, identify and compare the so-called Topologically Associating Domains (TADs), build 3D models from the interaction matrices, and finally, extract structural properties from the models. TADbit is complemented by TADkit for visualizing 3D models
Cost-efficient genome-wide gene expression profiling
A cross-platform and Efficient NCBI Taxonomy Toolkit
GUI/CommandLine Tool Box for biologistists to utilize NGS data.
Computation using data flow graphs for scalable machine learning
test_io1
High performance, multi-platform VNC client and server
TileDB
tmux source code
Manage complex tmux sessions easily
A declarative, efficient, and flexible JavaScript library for building user interfaces.
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
The Web framework for perfectionists with deadlines.
A PHP framework for web artisans
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
We are working to build community through open source technology. NB: members must have two-factor auth.
Open source projects and samples from Microsoft.
Google ❤️ Open Source for everyone.
Alibaba Open Source for everyone
Data-Driven Documents codes.
China tencent open source team.