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Rmarkdown scripts for adult human postmortem SN & Cortex cell atlas project.

License: GNU General Public License v3.0

R 100.00%
10xgenomics single-nuclei-rna-sequencing cell-atlas parkinsons-disease neurodegenerative-diseases magma ldscore

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SN_Cortex_cell_atlas

Rmarkdown scripts for 10x 3' single nuclei transcriptomic analysis of human post-mortem Cortex and Substania Nigra samples.

Citation: Agarwal, D., Sandor, C., Volpato, V., Caffrey, T., Monzon-Sandoval, J., Bowden, R., ... & Webber, C. (2020). A human single-cell atlas of the Substantia nigra reveals novel cell-specific pathways associated with the genetic risk of Parkinson′ s disease and neuropsychiatric disorders. bioRxiv. doi: https://doi.org/10.1101/2020.04.29.067587

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