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qupathpaquointegration

Code for the blogpost showing how to use Paquo to interact with, and classify, objects in QuPath with machine learning

rcc_pathology

Development of a Histopathology Informatics Pipeline for Classification and Prediction of Clinical Outcome in Subtypes of Renal Cell Carcinoma. Clinical Cancer Research. 2021 Mar 15. doi: 10.1158/1078-0432.CCR-20-4119. Online ahead of print.

recipes-with-angular-js-examples

Recipes with Angular.js

resnet

Reproduce ResNet-v2(Identity Mappings in Deep Residual Networks) with MXNet

simclr

SimCLRv2 - Big Self-Supervised Models are Strong Semi-Supervised Learners

stanford_dl_ex

Programming exercises for the Stanford Unsupervised Feature Learning and Deep Learning Tutorial

tensorflow-tutorials

TensorFlow Tutorials with YouTube Videos

tensorflow_input_image_by_tfrecord

Feed your own image data to a pre-trained network by tensorflow

tf-wsi-dataset-utils

An optimized pipeline for working with Whole Slide Image (WSI) data in Tensorflow

tifffile

Read and write TIFF files. Forked from https://pypi.org/project/tifffile

tissuenet-cervical-biopsies

Winners of the TissueNet: Detect Lesions in Cervical Biopsies competition

tkcalculator

A simple but tolerable calculator application made using Tkinter and Python 3.4

tkinter-snake

A really simple snake clone using Python 3 and TkInter.

tkinter3

A sample form registration from Python using tkinter

trcc-ccrcc-classification

tulane-python-data-visualization-workshop

Workshop materials and data visualization resources for the Introduction to Python for Data Visualization Workshop at Tulane University Howard-Tilton Memorial Library

unet

unet for image segmentation

weasyprint

The awesome document factory

wsi-analysis

Python scripts for automatic Whole-Slide Image preprocessing.

yolov5

YOLOv5 🚀 in PyTorch > ONNX > CoreML > TFLite