diegommcc / digitaldlsorter Goto Github PK
View Code? Open in Web Editor NEWdigitalDLSorteR: An R package to deconvolute bulk RNA-Seq using scRNA-Seq data
Home Page: https://diegommcc.github.io/digitalDLSorteR/
digitalDLSorteR: An R package to deconvolute bulk RNA-Seq using scRNA-Seq data
Home Page: https://diegommcc.github.io/digitalDLSorteR/
Hi DigitalDLSorter team,
I am very interested in your DigitalDLSorter, this idea deeply attracted me. When I read your paper and github code, I have two confusion and need to consult you.
(1) Your article mentions converting TCGA data to tpm as the data unit, but in your code description it mentions cpm, whether you are using cpm or tpm.
(2) I think the dimensions of bulk data and single-cell data are different. How do you ensure that your integrated pseudo-bulk expression profile is in the same order of magnitude as the real bulk data expression profile?
Picture from Digitaldlsorter: Deep-Learning on scRNA-Seq to Deconvolute Gene Expression Data
Picture from https://github.com/cran/digitalDLSorteR
A declarative, efficient, and flexible JavaScript library for building user interfaces.
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
The Web framework for perfectionists with deadlines.
A PHP framework for web artisans
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
We are working to build community through open source technology. NB: members must have two-factor auth.
Open source projects and samples from Microsoft.
Google ❤️ Open Source for everyone.
Alibaba Open Source for everyone
Data-Driven Documents codes.
China tencent open source team.