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Edinburgh Genome Foundry's Projects

bandwagon icon bandwagon

🎺 Plot DNA digestion band patterns with Python

bandwitch icon bandwitch

💫 Computer-aided DNA assembly validation and identification from restriction digests.

bioprinter icon bioprinter

🖨️ Print pictures with living micro-organisms !

blabel icon blabel

:label: Python label/sticker PDF generation. HTML templates, built-in barcodes, qr codes, and other goodies

cab icon cab

:oncoming_taxi: The friendly Computational App Boilerplate. Django + Vue.JS + Redis queues + NginX

caravagene icon caravagene

🎨 Python library to plot multi-part genetic constructs

crazydoc icon crazydoc

Read DNA sequences from colourful Microsoft Word documents

crecombio icon crecombio

A simple Cre, Flp and other site-specific recombination simulator

cuba icon cuba

🏖️ The EGF Collection of Useful Bio Apps - Web demos of EGF software

dab icon dab

:point_right: EGF Design and Build, the Foundry's DNA design ordering portal

dioscuri icon dioscuri

Python package for working with Gemini WorkList (gwl) files

dna-scanner icon dna-scanner

Online tool for comparing prices and feasibility of DNA synthesis

dnacauldron icon dnacauldron

:alembic: Simple cloning simulator (Golden Gate etc.) for single and combinatorial assemblies

dnachisel icon dnachisel

:pencil2: A versatile DNA sequence optimizer

dnafeaturesviewer icon dnafeaturesviewer

:eye: Python library to plot DNA sequence features (e.g. from Genbank files)

easy_dna icon easy_dna

:school_satchel: Python library to read, write, edit DNA sequences

ediacara icon ediacara

Python package for interpreting sequencing data of assembled DNA constructs (plasmids)

egf_xmltodict icon egf_xmltodict

Python module that makes working with XML feel like you are working with JSON

examples icon examples

Collection of Python modules and Jupyter notebook examples

flametree icon flametree

:fire: Python file and zip operations made easy

galaxy_synbiocad_dnaweaver icon galaxy_synbiocad_dnaweaver

Archived Galaxy node for the manufacturing step of the SynBioCAD project. See latest version here: https://github.com/brsynth/DNAWeaver_SynBioCAD

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