egeulgen / driver Goto Github PK
View Code? Open in Web Editor NEWPrioritizing Cancer Driver Genes Using Genomics Data
Home Page: https://egeulgen.github.io/driveR/
License: Other
Prioritizing Cancer Driver Genes Using Genomics Data
Home Page: https://egeulgen.github.io/driveR/
License: Other
Dear maintainer,
You have file 'driveR/man/driveR.Rd' with \docType{package}, likely
intended as a package overview help file, but without the appropriate
PKGNAME-package \alias as per "Documenting packages" in R-exts.This seems to be the consequence of the breaking change
Using @doctype package no longer automatically adds a -package alias.
Instead document _PACKAGE to get all the defaults for package
documentation.in roxygen2 7.0.0 (2019-11-12) having gone unnoticed, see
r-lib/roxygen2#1491.As explained in the issue, to get the desired PKGNAME-package \alias
back, you should either change to the new approach and document the new
special sentinel"_PACKAGE"
or manually add
@Aliases driveR-package
if remaining with the old approach.
Please fix in your master sources as appropriate, and submit a fixed
version of your package within the next few months.Best,
-k
Prepare for release:
devtools::build_readme()
urlchecker::url_check()
devtools::check(remote = TRUE, manual = TRUE)
devtools::check_win_devel()
rhub::check_for_cran()
revdepcheck::revdep_check(num_workers = 4)
cran-comments.md
Submit to CRAN:
usethis::use_version('minor')
devtools::submit_cran()
Wait for CRAN...
usethis::use_github_release()
usethis::use_dev_version()
Prepare for release:
git pull
devtools::build_readme()
urlchecker::url_check()
devtools::check(remote = TRUE, manual = TRUE)
devtools::check_win_devel()
rhub::check_for_cran()
revdepcheck::revdep_check(num_workers = 4)
cran-comments.md
git push
Submit to CRAN:
usethis::use_version('minor')
devtools::submit_cran()
Wait for CRAN...
git push
usethis::use_github_release()
usethis::use_dev_version()
git push
Prepare for release:
git pull
usethis::use_github_links()
urlchecker::url_check()
devtools::build_readme()
devtools::check(remote = TRUE, manual = TRUE)
devtools::check_win_devel()
revdepcheck::revdep_check(num_workers = 4)
cran-comments.md
git push
Submit to CRAN:
usethis::use_version('patch')
devtools::submit_cran()
Wait for CRAN...
usethis::use_github_release()
usethis::use_dev_version(push = TRUE)
Allow gene-level SCNA data frame to be used as input for create_features_df()
Prepare for release:
devtools::build_readme()
devtools::check(remote = TRUE, manual = TRUE)
devtools::check_win_devel()
rhub::check_for_cran()
revdepcheck::revdep_check(num_workers = 4)
cran-comments.md
Submit to CRAN:
usethis::use_version('patch')
devtools::submit_cran()
Wait for CRAN...
usethis::use_github_release()
usethis::use_dev_version()
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