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predicting the buggy source files from the bug reports.

Python 100.00%
bug-localization deep-neural-networks information-retrieval

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bug-localization-by-dnn-and-rvsm's Issues

Where are data/Eclipse_Platform_UI.txt and data/feature.csv files?

hi there,
I am trying to reproduce the same results but unable to find the starting point of the code.
How to extract the features and what path changes to repository and bug reports are required?
What is the format of Eclipse_Platform_UI.txt is this a Bug Report in txt format and how to obtain this file?
when feature.csv file is generated and which files are required to generate feature.csv file?

ValueError: kth(=-1) out of bounds (2)

Hi @hacetin and @mrdogan7 ,
Can you please have a look at the error and guide me to fix this.
I guess it has something to do with numpy can you please tell me the version of numpy you used for your experiment.
Thanks

python = 3.5.4
numpy = 1.16.3
Feature File Sample:
our_features.zip

>python rvsmModel.py

Traceback (most recent call last):
  File "rvsmModel.py", line 46, in <module>
    max_indices = np.argpartition(relevancy_list, -i)[-i:]
  File "C:\Program Files\Anaconda2\envs\tensorflow\lib\site-packages\numpy\core\fromnumeric.py", line 808, in argpartition
    return _wrapfunc(a, 'argpartition', kth, axis=axis, kind=kind, order=order)
  File "C:\Program Files\Anaconda2\envs\tensorflow\lib\site-packages\numpy\core\fromnumeric.py", line 56, in _wrapfunc
    return getattr(obj, method)(*args, **kwds)
ValueError: kth(=-1) out of bounds (2)

>python dnnModel.py


Experiment Counter 1
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{'bundles\\org.eclipse.e4.ui.bindings\\src\\org\\eclipse\\e4\\ui\\bindings\\EBindingService.java': [0.0, 0.0, 0.0, 0.0, 0.0]}
{'bundles\\org.eclipse.e4.ui.services\\src\\org\\eclipse\\e4\\ui\\internal\\services\\ActiveContextsFunction.java': [0.008460774, 0.0, 0.0, 0.0, 0.0]}
{'bundles\\org.eclipse.e4.ui.workbench.swt\\src\\org\\eclipse\\e4\\ui\\workbench\\swt\\internal\\PartRenderingEngine.java': [0.003455666, 0.0, 0.0, 0.0, 0.0]}
{'bundles\\org.eclipse.e4.ui.workbench.swt\\src\\org\\eclipse\\e4\\ui\\workbench\\swt\\internal\\ShellActivationListener.java': [0.0, 0.0, 0.0, 0.0, 0.0]}
{'bundles\\org.eclipse.ui.workbench\\Eclipse UI\\org\\eclipse\\ui\\application\\ActionBarAdvisor.java': [0.001321923, 0.0, 0.0, 0.0, 0.0]}
{'bundles\\org.eclipse.ui.workbench\\Eclipse UI\\org\\eclipse\\ui\\internal\\EditorReference.java': [0.0019486, 0.0, 0.0, 0.0, 0.0]}
{'bundles\\org.eclipse.ui.workbench\\Eclipse UI\\org\\eclipse\\ui\\internal\\WorkbenchWindow.java': [0.002646416, 0.0, 0.0, 0.0, 0.0]}
{'bundles\\org.eclipse.ui.workbench\\Eclipse UI\\org\\eclipse\\ui\\internal\\e4\\compatibility\\CompatibilityEditor.java': [0.0, 0.0, 0.0, 0.0, 0.0]}
{'bundles\\org.eclipse.ui.workbench\\Eclipse UI\\org\\eclipse\\ui\\internal\\e4\\compatibility\\CompatibilityPart.java': [0.002958554, 0.0, 0.0, 0.0, 0.0]}
{'bundles\\org.eclipse.ui.workbench\\Eclipse UI\\org\\eclipse\\ui\\operations\\RedoActionHandler.java': [0.0, 0.0, 0.0, 0.0, 0.0]}
{'bundles\\org.eclipse.ui.workbench\\Eclipse UI\\org\\eclipse\\ui\\operations\\UndoActionHandler.java': [0.0, 0.0, 0.0, 0.0, 0.0]}
{'bundles\\org.eclipse.e4.ui.css.swt\\src\\org\\eclipse\\e4\\ui\\css\\swt\\resources\\SWTResourcesRegistry.java': [0.068003252, 0.0, 0.0, 0.0, 0.0]}
{'bundles\\org.eclipse.ui.workbench\\Eclipse UI\\org\\eclipse\\ui\\internal\\wizards\\preferences\\PreferencesImportWizard.java': [0.029404338, 0.0, 0.0, 0.0, 0.0]}
{'tests\\org.eclipse.e4.ui.tests\\src\\org\\eclipse\\e4\\ui\\tests\\application\\ResourceHandlerTest.java': [0.025898456, 0.0, 0.0, 0.0, 0.0]}
{'bundles\\org.eclipse.ui.workbench\\Eclipse UI\\org\\eclipse\\ui\\internal\\layout\\TrimDragPreferenceDialog.java': [0.025188708, 0.0, 0.0, 0.0, 0.0]}
{'bundles\\org.eclipse.ui.workbench\\Eclipse UI\\org\\eclipse\\ui\\internal\\dialogs\\FileEditorsPreferencePage.java': [0.019991912, 0.0, 0.0, 0.0, 0.0]}
{'bundles\\org.eclipse.ui.workbench\\Eclipse UI\\org\\eclipse\\ui\\IEditorActionBarContributor.java': [0.01550678, 0.0, 0.0, 0.0, 0.0]}
{'bundles\\org.eclipse.ui.workbench\\Eclipse UI\\org\\eclipse\\ui\\application\\WorkbenchWindowAdvisor.java': [0.015182553, 0.0, 0.0, 0.0, 0.0]}
{'tests\\org.eclipse.e4.ui.tests.css.swt\\tkuiTestsToRefactor\\swt\\test\\org\\akrogen\\tkui\\css\\core\\examples\\csseditors\\AbstractCSSEditor.java': [0.014585013, 0.0, 0.0, 0.0, 0.0]}
{'bundles\\org.eclipse.e4.ui.workbench.swt\\src\\org\\eclipse\\e4\\ui\\internal\\workbench\\swt\\E4Application.java': [0.013496765, 0.0, 0.0, 0.0, 0.0]}
{'tests\\org.eclipse.e4.ui.compatibility.tests\\src\\org\\eclipse\\e4\\ui\\compatibility\\tests\\views\\SampleView.java': [0.01198483, 0.0, 0.0, 0.0, 0.0]}
{'bundles\\org.eclipse.ui.workbench\\Eclipse UI\\org\\eclipse\\ui\\internal\\WorkbenchPage.java': [0.009876152, 0.0, 0.0, 0.0, 0.0]}
{'bundles\\org.eclipse.e4.core.commands\\src\\org\\eclipse\\e4\\core\\commands\\internal\\HandlerServiceImpl.java': [0.002312459, 0.0, 0.0, 0.0, 0.0]}
{'bundles\\org.eclipse.ui.workbench\\Eclipse UI\\org\\eclipse\\ui\\internal\\dialogs\\AdaptableForwarder.java': [0.026435635, 0.0, 0.0, 0.0, 0.0]}
Traceback (most recent call last):
  File "dnnModel.py", line 122, in <module>
    max_indices = np.argpartition(relevancy_list, -i)[-i:]
  File "C:\Program Files\Anaconda2\envs\tensorflow\lib\site-packages\numpy\core\fromnumeric.py", line 808, in argpartition
    return _wrapfunc(a, 'argpartition', kth, axis=axis, kind=kind, order=order)
  File "C:\Program Files\Anaconda2\envs\tensorflow\lib\site-packages\numpy\core\fromnumeric.py", line 56, in _wrapfunc
    return getattr(obj, method)(*args, **kwds)
ValueError: kth(=-1) out of bounds (2)

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