erinwitkop Goto Github PK
Name: Erin M. Witkop
Type: User
Erin M. Witkop's Projects
2018-10-31-uri
Template for future workshop
2020-07-13-noaa-online
Website and repository for NOAA Data Carpentry Ecology Workshop July 13th-July17th, 2020 (online).
2020_invitro_hemocyte_dermo_transcriptomes
apoptosis-data-analysis-dermo-challenge-2018
Analysis scripts looking at apoptosis phenotype in eastern oysters challenged with Dermo
apoptosis-genome-re-sequencing-data
This repository contains code I used to process whole genome resequencing data to characterize duplicated apoptosis-related gene families.
apoptosis-pathway-annotation-comparative-genomics
Apoptosis Pathway Manual Annotation scripts for C. virginica and C. gigas
apoptosis_data_pipeline
This repository houses the pipeline I coded to perform differential analysis of transcriptomes from two oyster species, C. gigas and C. virginica and isolate genes in the apoptosis pathway.
assignment_3
big_data_final_project_complete
big_data_week3
bio594
data_carpentry
This repository houses lessons and lesson plans created by Erin Roberts, certified Data Carpentry Instructor, for use during lessons.
dermo_apoptosis_analysis
eogc-cafe-gene-family-analysis
erinroberts.github.io
oyster-resequencing-shiny
This repository houses code for the shiny app I created to manipulate environmental data from the eastern oyster genome resequencing project
python_pattern_counting
shell-genomics
tidytuesday
Repository hosting plotting and analysis code for #tidytuesday
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