erinwitkop / big_data_final_project_complete

Big_Data_Final_project

This repository contains scripts and data files that process the most recently assembled Human Genome and the assembly of expressed

transcript sequences available from NCBI: https://www.ncbi.nlm.nih.gov/projects/genome/guide/human/#download. The files used in this analysis were

were the Reference Genome Sequence, the RefSeq Reference Genome Annotation, RefSeq Transcripts, and RefSeq Proteins.

The script in this file gathers sequences and genes from the GIMAP gene family and the ensembl gene ids for genes

from up to 100kb around it, and lists the locations of all the GIMAP genes in the Human genome in a text file format.

#USAGE: $ bash Big_Data_Analysis1.sh