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case-studies's Issues

Make links to notebooks prominent

Ref: openjournals/joss-reviews#3285 (comment)

Ran all the case studies locally on my machine by copying and pasting code. A couple worked fine, the others seemed to work ok but had very long MCMC chains and I didn't hang around to check their output. Could be neat to have these as notebooks in a notebooks/ directory on GitHub, as you just know people (read: me) are going to hack these as recipes to run on their own data.

Issue Generating Corner Plot

Working with the two transit case study. Sampling runs fine but generating the corner plot runs into this issue:

  File "case_study.py", line 122, in <module>
    var_names=["period", "r"]

  File "/home/<user>/anaconda3/lib/python3.7/site-packages/corner/corner.py", line 214, in corner
    range = [[x.min(), x.max()] for x in xs]

  File "/home/<user>/anaconda3/lib/python3.7/site-packages/corner/corner.py", line 214, in <listcomp>
    range = [[x.min(), x.max()] for x in xs]

  File "/home/<user>/anaconda3/lib/python3.7/site-packages/numpy/core/_methods.py", line 34, in _amin
    return umr_minimum(a, axis, None, out, keepdims, initial, where)

TypeError: cannot perform reduce with flexible type

I assume the case studies have been updated recently because I've been able to run them just fine when I started using exoplanet.

Issue on page /tutorials/rv.html

Hi, I have been reading the excellent case studies using exoplanet in order to figure out some issues with my own problems. One thing that has been bugging me, and is present in your examples, is the reparameterisations of variables.

For example, in the exoplanet examples, often the prior is specified for the log of a parameter. However there is no line that incorporates the jacobian for this change of variables, i.e. through pm.Potential.

Should the jacobian be present, or is not required in these cases?

findfont: Generic family 'sans-serif' not found because none of the following families were found: Liberation Sans

Exoplanet seems to corrupt matplotlib.
exoplanet.version = '0.5.3'

Tried multiple Conda environments Python 3.7, 3.8, 3.10, 3.11

Adding test code shows matplotlib working normally until:
import exoplanet.

Then every matplotlib cell generates many:
findfont: Generic family 'sans-serif' not found because none of the following families were found: Liberation Sans

astrometric.ipynb has the above issue initially in Python 3.7 until code:
The plot on the sky is helpful to look at, but the "raw" measurements are the values of $\rho$ (separation) and $\theta$ (also called P.A., position angle) that we listed in our data table, and that the measurement uncertainties live on these values as nice Gaussians. So, to visualize this space more clearly, we can plot $\rho$ vs. time and P.A. vs. time.

Then lower cells in Python 3.7 work without issue with matplotlib.
Higher Python versions have the above issue continuously.

Screen Shot 2023-08-16 at 10 41 10 AM Screen Shot 2023-08-16 at 10 41 37 AM Screen Shot 2023-08-16 at 10 41 47 AM Screen Shot 2023-08-16 at 10 45 11 AM

Matplotlib Test case:

Screen Shot 2023-08-16 at 10 43 52 AM

After import exoplanet:

Screen Shot 2023-08-16 at 10 46 08 AM

Issue on page /tutorials/tess.html and/or in documentation of get_ror_from_approx_transit_depth

This case study has: "r_pl = pm.Deterministic("r_pl", ror * r_star)" for calculating the planetary radius. According to the documentation for get_light_curve, r_pl is in units of solar radii, not the host star radius. However, this example gets ror from get_ror_from_approx_transit_depth, for which the documentation says ror is the radius ratio and is not explicit about units. I suggest clarifying in both the case study tutorial and in the documentation about the units.

Print runtime summaries at the tops of notebooks

Ref: openjournals/joss-reviews#3285 (comment)

It could also be nice to print run times on the case studies, so that prospective users know roughly how long each stage should take. Some of the MCMC chains and optimizations take a while to compute (of course), but as users are choosing between a few alternative packages, it will be helpful to know how this performs.

In particular it might be nice to have runtime for the sampling and the overall runtime separate with some text emphasizing the Theano compilation overhead.

Make imports and warning quashing less opaque

Ref: openjournals/joss-reviews#3285 (comment)

Just a note - check they all import matplotlib.pyplot as plt somewhere at the top? A couple of these don't and I needed to add this line. Perhaps the GitHub actions are importing this already?

and

There are many warnings: perhaps in the interests of a reader hoping to clone code there could be a warnings filter placed at the top. For example, I get a lot of (and this may be to do with my Python environment)...

Currently there is a hidden cell that sets up plotting and squashes these warnings. There's not much we can do about these warnings since they're a deeper pymc/theano issue, but we should at least make it clear that we're doing what we're doing. I do also currently import matplotlib in that cell so in some cases it might be hiding the previous issue.

Exoplanet install fails under Python 3.11.4

pip install -U exoplanet

ERROR: Failed building wheel for numpy
Failed to build numpy
ERROR: Could not build wheels for numpy, which is required to install pyproject.toml-based projects

Full install:

conda create --name env3114Exoplanet python=3.11.4
Collecting package metadata (current_repodata.json): done
Solving environment: done

Package Plan

environment location: /Users/josephkarpinski/anaconda3/envs/env3114Exoplanet

added / updated specs:
- python=3.11.4

The following NEW packages will be INSTALLED:

bzip2 pkgs/main/osx-64::bzip2-1.0.8-h1de35cc_0
ca-certificates pkgs/main/osx-64::ca-certificates-2023.05.30-hecd8cb5_0
libffi pkgs/main/osx-64::libffi-3.4.4-hecd8cb5_0
ncurses pkgs/main/osx-64::ncurses-6.4-hcec6c5f_0
openssl pkgs/main/osx-64::openssl-3.0.10-hca72f7f_0
pip pkgs/main/osx-64::pip-23.2.1-py311hecd8cb5_0
python pkgs/main/osx-64::python-3.11.4-hf27a42d_0
readline pkgs/main/osx-64::readline-8.2-hca72f7f_0
setuptools pkgs/main/osx-64::setuptools-68.0.0-py311hecd8cb5_0
sqlite pkgs/main/osx-64::sqlite-3.41.2-h6c40b1e_0
tk pkgs/main/osx-64::tk-8.6.12-h5d9f67b_0
tzdata pkgs/main/noarch::tzdata-2023c-h04d1e81_0
wheel pkgs/main/osx-64::wheel-0.38.4-py311hecd8cb5_0
xz pkgs/main/osx-64::xz-5.4.2-h6c40b1e_0
zlib pkgs/main/osx-64::zlib-1.2.13-h4dc903c_0

Proceed ([y]/n)? y

Downloading and Extracting Packages

Preparing transaction: done
Verifying transaction: done
Executing transaction: done

conda activate env3114Exoplanet
(env3114Exoplanet) josephkarpinski@Josephs-iMac ~ % pip install -U exoplanet
Collecting exoplanet
Using cached exoplanet-0.5.3-py3-none-any.whl (41 kB)
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Obtaining dependency information for astropy>=3.1 from https://files.pythonhosted.org/packages/14/f4/337aacc8138cf66f434ca26a06f3bc9c692b924aae5fe7117a12713028b2/astropy-5.3.2-cp311-cp311-macosx_10_9_x86_64.whl.metadata
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Collecting numpy<1.22 (from exoplanet)
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Installing build dependencies ... done
Getting requirements to build wheel ... done
Preparing metadata (pyproject.toml) ... done
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Collecting cachetools>=4.2.1 (from pymc3>=3.9->exoplanet)
Obtaining dependency information for cachetools>=4.2.1 from https://files.pythonhosted.org/packages/a9/c9/c8a7710f2cedcb1db9224fdd4d8307c9e48cbddc46c18b515fefc0f1abbe/cachetools-5.3.1-py3-none-any.whl.metadata
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Collecting dill (from pymc3>=3.9->exoplanet)
Obtaining dependency information for dill from https://files.pythonhosted.org/packages/f5/3a/74a29b11cf2cdfcd6ba89c0cecd70b37cd1ba7b77978ce611eb7a146a832/dill-0.3.7-py3-none-any.whl.metadata
Using cached dill-0.3.7-py3-none-any.whl.metadata (9.9 kB)
Collecting fastprogress>=0.2.0 (from pymc3>=3.9->exoplanet)
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Collecting pandas>=0.24.0 (from pymc3>=3.9->exoplanet)
Obtaining dependency information for pandas>=0.24.0 from https://files.pythonhosted.org/packages/b3/92/a5e5133421b49e901a12e02a6a7ef3a0130e10d13db8cb657fdd0cba3b90/pandas-2.0.3-cp311-cp311-macosx_10_9_x86_64.whl.metadata
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Collecting patsy>=0.5.1 (from pymc3>=3.9->exoplanet)
Using cached patsy-0.5.3-py2.py3-none-any.whl (233 kB)
INFO: pip is looking at multiple versions of pymc3 to determine which version is compatible with other requirements. This could take a while.
Collecting pymc3>=3.9 (from exoplanet)
Using cached pymc3-3.11.4-py3-none-any.whl (869 kB)
Collecting scipy>=1.2.0 (from pymc3>=3.9->exoplanet)
Obtaining dependency information for scipy>=1.2.0 from https://files.pythonhosted.org/packages/c7/09/c07278f3c75018f80288032b09acd76aa4c2056cdb7fa9b0a145bac6b06b/scipy-1.11.1-cp311-cp311-macosx_10_9_x86_64.whl.metadata
Using cached scipy-1.11.1-cp311-cp311-macosx_10_9_x86_64.whl.metadata (54 kB)
Collecting semver>=2.13.0 (from pymc3>=3.9->exoplanet)
Obtaining dependency information for semver>=2.13.0 from https://files.pythonhosted.org/packages/d4/5d/f2b4fe45886238c405ad177ca43911cb1459d08003004da5c27495eb4216/semver-3.0.1-py3-none-any.whl.metadata
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Collecting theano-pymc==1.1.2 (from pymc3>=3.9->exoplanet)
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Collecting typing-extensions>=3.7.4 (from pymc3>=3.9->exoplanet)
Obtaining dependency information for typing-extensions>=3.7.4 from https://files.pythonhosted.org/packages/ec/6b/63cc3df74987c36fe26157ee12e09e8f9db4de771e0f3404263117e75b95/typing_extensions-4.7.1-py3-none-any.whl.metadata
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Collecting filelock (from theano-pymc==1.1.2->pymc3>=3.9->exoplanet)
Obtaining dependency information for filelock from https://files.pythonhosted.org/packages/00/45/ec3407adf6f6b5bf867a4462b2b0af27597a26bd3cd6e2534cb6ab029938/filelock-3.12.2-py3-none-any.whl.metadata
Using cached filelock-3.12.2-py3-none-any.whl.metadata (2.7 kB)
Requirement already satisfied: setuptools>=60.0.0 in ./anaconda3/envs/env3114Exoplanet/lib/python3.11/site-packages (from arviz>=0.11.0->pymc3>=3.9->exoplanet) (68.0.0)
Collecting matplotlib>=3.2 (from arviz>=0.11.0->pymc3>=3.9->exoplanet)
Obtaining dependency information for matplotlib>=3.2 from https://files.pythonhosted.org/packages/7e/2c/1e25437f4419f2828bbd213be42c8fd23a3b795c5c4bb776987d177fc615/matplotlib-3.7.2-cp311-cp311-macosx_10_12_x86_64.whl.metadata
Using cached matplotlib-3.7.2-cp311-cp311-macosx_10_12_x86_64.whl.metadata (5.6 kB)
Collecting xarray>=0.21.0 (from arviz>=0.11.0->pymc3>=3.9->exoplanet)
Obtaining dependency information for xarray>=0.21.0 from https://files.pythonhosted.org/packages/cf/2f/e696512aa1e4e2ee1cf1e0bdbab6042f6c782058eb0a4367184ce4343f36/xarray-2023.7.0-py3-none-any.whl.metadata
Using cached xarray-2023.7.0-py3-none-any.whl.metadata (6.0 kB)
Collecting h5netcdf>=1.0.2 (from arviz>=0.11.0->pymc3>=3.9->exoplanet)
Obtaining dependency information for h5netcdf>=1.0.2 from https://files.pythonhosted.org/packages/d1/11/8116d6f209c8588ceb1382fddb8820fc720330373d9bd1a09434d684dbde/h5netcdf-1.2.0-py3-none-any.whl.metadata
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Collecting xarray-einstats>=0.3 (from arviz>=0.11.0->pymc3>=3.9->exoplanet)
Obtaining dependency information for xarray-einstats>=0.3 from https://files.pythonhosted.org/packages/ad/fc/99e00b0498d9f7258a89bd1b76baa8d8af84dd745d48b6f99f5fb399a91e/xarray_einstats-0.6.0-py3-none-any.whl.metadata
Using cached xarray_einstats-0.6.0-py3-none-any.whl.metadata (5.7 kB)
Collecting python-dateutil>=2.8.2 (from pandas>=0.24.0->pymc3>=3.9->exoplanet)
Using cached python_dateutil-2.8.2-py2.py3-none-any.whl (247 kB)
Collecting pytz>=2020.1 (from pandas>=0.24.0->pymc3>=3.9->exoplanet)
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Collecting tzdata>=2022.1 (from pandas>=0.24.0->pymc3>=3.9->exoplanet)
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INFO: pip is looking at multiple versions of pandas to determine which version is compatible with other requirements. This could take a while.
Collecting pandas>=0.24.0 (from pymc3>=3.9->exoplanet)
Obtaining dependency information for pandas>=0.24.0 from https://files.pythonhosted.org/packages/2a/49/be958fefa589186b54daaa9a72fa1a2e19e42a2dcab87ee15c8273259da0/pandas-2.0.2-cp311-cp311-macosx_10_9_x86_64.whl.metadata
Using cached pandas-2.0.2-cp311-cp311-macosx_10_9_x86_64.whl.metadata (18 kB)
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Using cached pandas-1.5.1-cp311-cp311-macosx_10_9_x86_64.whl (11.8 MB)
Collecting six (from patsy>=0.5.1->pymc3>=3.9->exoplanet)
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INFO: pip is looking at multiple versions of scipy to determine which version is compatible with other requirements. This could take a while.
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Using cached scipy-1.10.1-cp311-cp311-macosx_10_9_x86_64.whl (35.0 MB)
Collecting h5py (from h5netcdf>=1.0.2->arviz>=0.11.0->pymc3>=3.9->exoplanet)
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Collecting contourpy>=1.0.1 (from matplotlib>=3.2->arviz>=0.11.0->pymc3>=3.9->exoplanet)
Obtaining dependency information for contourpy>=1.0.1 from https://files.pythonhosted.org/packages/92/4d/fe7a7098d98a8889252105193f5e869532f9dc37e39d917a82d2b0b874a1/contourpy-1.1.0-cp311-cp311-macosx_10_9_x86_64.whl.metadata
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Collecting fonttools>=4.22.0 (from matplotlib>=3.2->arviz>=0.11.0->pymc3>=3.9->exoplanet)
Obtaining dependency information for fonttools>=4.22.0 from https://files.pythonhosted.org/packages/e8/e0/d1a65471a945b0764ee17ce4afb59af8761b33c4418ca35687639315fcb7/fonttools-4.42.0-cp311-cp311-macosx_10_9_x86_64.whl.metadata
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Collecting pillow>=6.2.0 (from matplotlib>=3.2->arviz>=0.11.0->pymc3>=3.9->exoplanet)
Obtaining dependency information for pillow>=6.2.0 from https://files.pythonhosted.org/packages/7a/54/f6a14d95cba8ff082c550d836c9e5c23f1641d2ac291c23efe0494219b8c/Pillow-10.0.0-cp311-cp311-macosx_10_10_x86_64.whl.metadata
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Building wheels for collected packages: numpy
Building wheel for numpy (pyproject.toml) ... error
error: subprocess-exited-with-error

× Building wheel for numpy (pyproject.toml) did not run successfully.
│ exit code: 1
╰─> [1212 lines of output]
setup.py:63: RuntimeWarning: NumPy 1.21.1 may not yet support Python 3.11.
warnings.warn(
Running from numpy source directory.
Processing numpy/random/_bounded_integers.pxd.in
Processing numpy/random/_philox.pyx
Processing numpy/random/_bounded_integers.pyx.in
Processing numpy/random/_sfc64.pyx
Processing numpy/random/_mt19937.pyx
Processing numpy/random/bit_generator.pyx
Processing numpy/random/mtrand.pyx
Processing numpy/random/_generator.pyx
Processing numpy/random/_pcg64.pyx
Processing numpy/random/_common.pyx
Cythonizing sources
blas_opt_info:
blas_mkl_info:
customize UnixCCompiler
libraries mkl_rt not found in ['/Users/josephkarpinski/anaconda3/envs/env3114Exoplanet/lib', '/usr/local/lib', '/usr/lib']
NOT AVAILABLE

  blis_info:
    libraries blis not found in ['/Users/josephkarpinski/anaconda3/envs/env3114Exoplanet/lib', '/usr/local/lib', '/usr/lib']
    NOT AVAILABLE
  
  openblas_info:
    libraries openblas not found in ['/Users/josephkarpinski/anaconda3/envs/env3114Exoplanet/lib', '/usr/local/lib', '/usr/lib']
    NOT AVAILABLE
  
  accelerate_info:
    libraries accelerate not found in ['/Users/josephkarpinski/anaconda3/envs/env3114Exoplanet/lib', '/usr/local/lib', '/usr/lib']
  Library accelerate was not found. Ignoring
    libraries veclib not found in ['/Users/josephkarpinski/anaconda3/envs/env3114Exoplanet/lib', '/usr/local/lib', '/usr/lib']
  Library veclib was not found. Ignoring
    FOUND:
      extra_compile_args = ['-msse3', '-I/System/Library/Frameworks/vecLib.framework/Headers']
      extra_link_args = ['-Wl,-framework', '-Wl,Accelerate']
      define_macros = [('NO_ATLAS_INFO', 3), ('HAVE_CBLAS', None)]
  
    FOUND:
      extra_compile_args = ['-msse3', '-I/System/Library/Frameworks/vecLib.framework/Headers']
      extra_link_args = ['-Wl,-framework', '-Wl,Accelerate']
      define_macros = [('NO_ATLAS_INFO', 3), ('HAVE_CBLAS', None)]
  
  non-existing path in 'numpy/distutils': 'site.cfg'
  lapack_opt_info:
  lapack_mkl_info:
    libraries mkl_rt not found in ['/Users/josephkarpinski/anaconda3/envs/env3114Exoplanet/lib', '/usr/local/lib', '/usr/lib']
    NOT AVAILABLE
  
  openblas_lapack_info:
    libraries openblas not found in ['/Users/josephkarpinski/anaconda3/envs/env3114Exoplanet/lib', '/usr/local/lib', '/usr/lib']
    NOT AVAILABLE
  
  openblas_clapack_info:
    libraries openblas,lapack not found in ['/Users/josephkarpinski/anaconda3/envs/env3114Exoplanet/lib', '/usr/local/lib', '/usr/lib']
    NOT AVAILABLE
  
  flame_info:
    libraries flame not found in ['/Users/josephkarpinski/anaconda3/envs/env3114Exoplanet/lib', '/usr/local/lib', '/usr/lib']
    NOT AVAILABLE
  
    FOUND:
      extra_compile_args = ['-msse3', '-I/System/Library/Frameworks/vecLib.framework/Headers']
      extra_link_args = ['-Wl,-framework', '-Wl,Accelerate']
      define_macros = [('NO_ATLAS_INFO', 3), ('HAVE_CBLAS', None)]
  
  

  
  creating build/temp.macosx-10.9-x86_64-3.11/build/src.macosx-10.9-x86_64-3.11/numpy/core/src/umath
  compile options: '-DNPY_INTERNAL_BUILD=1 -DHAVE_NPY_CONFIG_H=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE=1 -D_LARGEFILE64_SOURCE=1 -DNO_ATLAS_INFO=3 -DHAVE_CBLAS -Ibuild/src.macosx-10.9-x86_64-3.11/numpy/core/src/common -Ibuild/src.macosx-10.9-x86_64-3.11/numpy/core/src/umath -Inumpy/core/include -Ibuild/src.macosx-10.9-x86_64-3.11/numpy/core/include/numpy -Ibuild/src.macosx-10.9-x86_64-3.11/numpy/distutils/include -Inumpy/core/src/common -Inumpy/core/src -Inumpy/core -Inumpy/core/src/npymath -Inumpy/core/src/multiarray -Inumpy/core/src/umath -Inumpy/core/src/npysort -Inumpy/core/src/_simd -I/Users/josephkarpinski/anaconda3/envs/env3114Exoplanet/include/python3.11 -Ibuild/src.macosx-10.9-x86_64-3.11/numpy/core/src/common -Ibuild/src.macosx-10.9-x86_64-3.11/numpy/core/src/npymath -c'
  extra options: '-msse3 -I/System/Library/Frameworks/vecLib.framework/Headers -O3 -msse -msse2 -msse3'
  clang: build/src.macosx-10.9-x86_64-3.11/numpy/core/src/umath/loops_unary_fp.dispatch.c
  clang: build/src.macosx-10.9-x86_64-3.11/numpy/core/src/umath/loops_arithm_fp.dispatch.c
  clang: build/src.macosx-10.9-x86_64-3.11/numpy/core/src/umath/loops_arithmetic.dispatch.c
  clang: build/src.macosx-10.9-x86_64-3.11/numpy/core/src/umath/loops_trigonometric.dispatch.c
  numpy/core/src/umath/loops_arithm_fp.dispatch.c.src:454:1: warning: unused function 'run_binary_simd_add_LONGDOUBLE' [-Wunused-function]
  run_binary_simd_add_LONGDOUBLE(char **args, npy_intp const *dimensions, npy_intp const *steps)
  ^
  numpy/core/src/umath/loops_arithm_fp.dispatch.c.src:454:1: warning: unused function 'run_binary_simd_subtract_LONGDOUBLE' [-Wunused-function]
  run_binary_simd_subtract_LONGDOUBLE(char **args, npy_intp const *dimensions, npy_intp const *steps)
  ^
  numpy/core/src/umath/loops_arithm_fp.dispatch.c.src:454:1: warning: unused function 'run_binary_simd_multiply_LONGDOUBLE' [-Wunused-function]
  run_binary_simd_multiply_LONGDOUBLE(char **args, npy_intp const *dimensions, npy_intp const *steps)
  ^
  numpy/core/src/umath/loops_arithm_fp.dispatch.c.src:454:1: warning: unused function 'run_binary_simd_divide_LONGDOUBLE' [-Wunused-function]
  run_binary_simd_divide_LONGDOUBLE(char **args, npy_intp const *dimensions, npy_intp const *steps)
  ^
  clang: build/src.macosx-10.9-x86_64-3.11/numpy/core/src/umath/loops_exponent_log.dispatch.c
  4 warnings generated.
  C compiler: clang -DNDEBUG -fwrapv -O2 -Wall -fPIC -O2 -isystem /Users/josephkarpinski/anaconda3/envs/env3114Exoplanet/include -fPIC -O2 -isystem /Users/josephkarpinski/anaconda3/envs/env3114Exoplanet/include
  
  compile options: '-DNPY_INTERNAL_BUILD=1 -DHAVE_NPY_CONFIG_H=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE=1 -D_LARGEFILE64_SOURCE=1 -DNO_ATLAS_INFO=3 -DHAVE_CBLAS -Ibuild/src.macosx-10.9-x86_64-3.11/numpy/core/src/common -Ibuild/src.macosx-10.9-x86_64-3.11/numpy/core/src/umath -Inumpy/core/include -Ibuild/src.macosx-10.9-x86_64-3.11/numpy/core/include/numpy -Ibuild/src.macosx-10.9-x86_64-3.11/numpy/distutils/include -Inumpy/core/src/common -Inumpy/core/src -Inumpy/core -Inumpy/core/src/npymath -Inumpy/core/src/multiarray -Inumpy/core/src/umath -Inumpy/core/src/npysort -Inumpy/core/src/_simd -I/Users/josephkarpinski/anaconda3/envs/env3114Exoplanet/include/python3.11 -Ibuild/src.macosx-10.9-x86_64-3.11/numpy/core/src/common -Ibuild/src.macosx-10.9-x86_64-3.11/numpy/core/src/npymath -c'
  extra options: '-msse3 -I/System/Library/Frameworks/vecLib.framework/Headers -O3 -msse -msse2 -msse3 -mssse3 -msse4.1 -mpopcnt -msse4.2 -mavx -mf16c -mfma -mavx2 -mavx512f'
  clang: build/src.macosx-10.9-x86_64-3.11/numpy/core/src/umath/loops_arithm_fp.dispatch.avx512f.c
  clang: build/src.macosx-10.9-x86_64-3.11/numpy/core/src/umath/loops_trigonometric.dispatch.avx512f.c
  clang: build/src.macosx-10.9-x86_64-3.11/numpy/core/src/umath/loops_exponent_log.dispatch.avx512f.c
  clang: build/src.macosx-10.9-x86_64-3.11/numpy/core/src/umath/loops_arithmetic.dispatch.avx512f.c
  C compiler: clang -DNDEBUG -fwrapv -O2 -Wall -fPIC -O2 -isystem /Users/josephkarpinski/anaconda3/envs/env3114Exoplanet/include -fPIC -O2 -isystem /Users/josephkarpinski/anaconda3/envs/env3114Exoplanet/include
  
  compile options: '-DNPY_INTERNAL_BUILD=1 -DHAVE_NPY_CONFIG_H=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE=1 -D_LARGEFILE64_SOURCE=1 -DNO_ATLAS_INFO=3 -DHAVE_CBLAS -Ibuild/src.macosx-10.9-x86_64-3.11/numpy/core/src/common -Ibuild/src.macosx-10.9-x86_64-3.11/numpy/core/src/umath -Inumpy/core/include -Ibuild/src.macosx-10.9-x86_64-3.11/numpy/core/include/numpy -Ibuild/src.macosx-10.9-x86_64-3.11/numpy/distutils/include -Inumpy/core/src/common -Inumpy/core/src -Inumpy/core -Inumpy/core/src/npymath -Inumpy/core/src/multiarray -Inumpy/core/src/umath -Inumpy/core/src/npysort -Inumpy/core/src/_simd -I/Users/josephkarpinski/anaconda3/envs/env3114Exoplanet/include/python3.11 -Ibuild/src.macosx-10.9-x86_64-3.11/numpy/core/src/common -Ibuild/src.macosx-10.9-x86_64-3.11/numpy/core/src/npymath -c'
  extra options: '-msse3 -I/System/Library/Frameworks/vecLib.framework/Headers -O3 -msse -msse2 -msse3 -mssse3 -msse4.1 -mpopcnt -msse4.2 -mavx -mf16c -mavx2'
  clang: build/src.macosx-10.9-x86_64-3.11/numpy/core/src/umath/loops_arithm_fp.dispatch.avx2.c
  clang: build/src.macosx-10.9-x86_64-3.11/numpy/core/src/umath/loops_arithmetic.dispatch.avx2.c
  C compiler: clang -DNDEBUG -fwrapv -O2 -Wall -fPIC -O2 -isystem /Users/josephkarpinski/anaconda3/envs/env3114Exoplanet/include -fPIC -O2 -isystem /Users/josephkarpinski/anaconda3/envs/env3114Exoplanet/include
  
  compile options: '-DNPY_INTERNAL_BUILD=1 -DHAVE_NPY_CONFIG_H=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE=1 -D_LARGEFILE64_SOURCE=1 -DNO_ATLAS_INFO=3 -DHAVE_CBLAS -Ibuild/src.macosx-10.9-x86_64-3.11/numpy/core/src/common -Ibuild/src.macosx-10.9-x86_64-3.11/numpy/core/src/umath -Inumpy/core/include -Ibuild/src.macosx-10.9-x86_64-3.11/numpy/core/include/numpy -Ibuild/src.macosx-10.9-x86_64-3.11/numpy/distutils/include -Inumpy/core/src/common -Inumpy/core/src -Inumpy/core -Inumpy/core/src/npymath -Inumpy/core/src/multiarray -Inumpy/core/src/umath -Inumpy/core/src/npysort -Inumpy/core/src/_simd -I/Users/josephkarpinski/anaconda3/envs/env3114Exoplanet/include/python3.11 -Ibuild/src.macosx-10.9-x86_64-3.11/numpy/core/src/common -Ibuild/src.macosx-10.9-x86_64-3.11/numpy/core/src/npymath -c'
  extra options: '-msse3 -I/System/Library/Frameworks/vecLib.framework/Headers -O3 -msse -msse2 -msse3 -mssse3 -msse4.1 -mpopcnt -msse4.2 -mavx -mf16c -mfma -mavx2 -mavx512f -mavx512cd -mavx512vl -mavx512bw -mavx512dq'
  clang: build/src.macosx-10.9-x86_64-3.11/numpy/core/src/umath/loops_arithmetic.dispatch.avx512_skx.c
  clang: build/src.macosx-10.9-x86_64-3.11/numpy/core/src/umath/loops_exponent_log.dispatch.avx512_skx.c
  C compiler: clang -DNDEBUG -fwrapv -O2 -Wall -fPIC -O2 -isystem /Users/josephkarpinski/anaconda3/envs/env3114Exoplanet/include -fPIC -O2 -isystem /Users/josephkarpinski/anaconda3/envs/env3114Exoplanet/include
  
  compile options: '-DNPY_INTERNAL_BUILD=1 -DHAVE_NPY_CONFIG_H=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE=1 -D_LARGEFILE64_SOURCE=1 -DNO_ATLAS_INFO=3 -DHAVE_CBLAS -Ibuild/src.macosx-10.9-x86_64-3.11/numpy/core/src/common -Ibuild/src.macosx-10.9-x86_64-3.11/numpy/core/src/umath -Inumpy/core/include -Ibuild/src.macosx-10.9-x86_64-3.11/numpy/core/include/numpy -Ibuild/src.macosx-10.9-x86_64-3.11/numpy/distutils/include -Inumpy/core/src/common -Inumpy/core/src -Inumpy/core -Inumpy/core/src/npymath -Inumpy/core/src/multiarray -Inumpy/core/src/umath -Inumpy/core/src/npysort -Inumpy/core/src/_simd -I/Users/josephkarpinski/anaconda3/envs/env3114Exoplanet/include/python3.11 -Ibuild/src.macosx-10.9-x86_64-3.11/numpy/core/src/common -Ibuild/src.macosx-10.9-x86_64-3.11/numpy/core/src/npymath -c'
  extra options: '-msse3 -I/System/Library/Frameworks/vecLib.framework/Headers -O3 -msse -msse2 -msse3 -mssse3 -msse4.1'
  clang: build/src.macosx-10.9-x86_64-3.11/numpy/core/src/umath/loops_arithmetic.dispatch.sse41.c
  C compiler: clang -DNDEBUG -fwrapv -O2 -Wall -fPIC -O2 -isystem /Users/josephkarpinski/anaconda3/envs/env3114Exoplanet/include -fPIC -O2 -isystem /Users/josephkarpinski/anaconda3/envs/env3114Exoplanet/include
  
  compile options: '-DNPY_INTERNAL_BUILD=1 -DHAVE_NPY_CONFIG_H=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE=1 -D_LARGEFILE64_SOURCE=1 -DNO_ATLAS_INFO=3 -DHAVE_CBLAS -Ibuild/src.macosx-10.9-x86_64-3.11/numpy/core/src/common -Ibuild/src.macosx-10.9-x86_64-3.11/numpy/core/src/umath -Inumpy/core/include -Ibuild/src.macosx-10.9-x86_64-3.11/numpy/core/include/numpy -Ibuild/src.macosx-10.9-x86_64-3.11/numpy/distutils/include -Inumpy/core/src/common -Inumpy/core/src -Inumpy/core -Inumpy/core/src/npymath -Inumpy/core/src/multiarray -Inumpy/core/src/umath -Inumpy/core/src/npysort -Inumpy/core/src/_simd -I/Users/josephkarpinski/anaconda3/envs/env3114Exoplanet/include/python3.11 -Ibuild/src.macosx-10.9-x86_64-3.11/numpy/core/src/common -Ibuild/src.macosx-10.9-x86_64-3.11/numpy/core/src/npymath -c'
  extra options: '-msse3 -I/System/Library/Frameworks/vecLib.framework/Headers -O3 -msse -msse2 -msse3 -mssse3 -msse4.1 -mpopcnt -msse4.2 -mavx -mf16c -mfma -mavx2'
  clang: build/src.macosx-10.9-x86_64-3.11/numpy/core/src/umath/loops_exponent_log.dispatch.fma3.avx2.c
  clang: build/src.macosx-10.9-x86_64-3.11/numpy/core/src/umath/loops_trigonometric.dispatch.fma3.avx2.c
  compiling C sources
  C compiler: clang -DNDEBUG -fwrapv -O2 -Wall -fPIC -O2 -isystem /Users/josephkarpinski/anaconda3/envs/env3114Exoplanet/include -fPIC -O2 -isystem /Users/josephkarpinski/anaconda3/envs/env3114Exoplanet/include
  
  creating build/temp.macosx-10.9-x86_64-3.11/numpy/core/src/multiarray
  creating build/temp.macosx-10.9-x86_64-3.11/build/src.macosx-10.9-x86_64-3.11/numpy/core/src/npysort
  creating build/temp.macosx-10.9-x86_64-3.11/numpy/core/src/umath
  creating build/temp.macosx-10.9-x86_64-3.11/build/src.macosx-10.9-x86_64-3.11/numpy/core/src/common
  compile options: '-DNPY_INTERNAL_BUILD=1 -DHAVE_NPY_CONFIG_H=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE=1 -D_LARGEFILE64_SOURCE=1 -DNO_ATLAS_INFO=3 -DHAVE_CBLAS -Ibuild/src.macosx-10.9-x86_64-3.11/numpy/core/src/common -Ibuild/src.macosx-10.9-x86_64-3.11/numpy/core/src/umath -Inumpy/core/include -Ibuild/src.macosx-10.9-x86_64-3.11/numpy/core/include/numpy -Ibuild/src.macosx-10.9-x86_64-3.11/numpy/distutils/include -Inumpy/core/src/common -Inumpy/core/src -Inumpy/core -Inumpy/core/src/npymath -Inumpy/core/src/multiarray -Inumpy/core/src/umath -Inumpy/core/src/npysort -Inumpy/core/src/_simd -I/Users/josephkarpinski/anaconda3/envs/env3114Exoplanet/include/python3.11 -Ibuild/src.macosx-10.9-x86_64-3.11/numpy/core/src/common -Ibuild/src.macosx-10.9-x86_64-3.11/numpy/core/src/npymath -c'
  extra options: '-msse3 -I/System/Library/Frameworks/vecLib.framework/Headers -msse -msse2 -msse3'
  clang: numpy/core/src/multiarray/calculation.c
  clang: numpy/core/src/multiarray/array_method.c
  clang: numpy/core/src/multiarray/abstractdtypes.c
  clang: numpy/core/src/multiarray/convert_datatype.c
  numpy/core/src/multiarray/convert_datatype.c:249:9: warning: comparison of nonnull parameter 'dtype' equal to a null pointer is 'false' on first encounter [-Wtautological-pointer-compare]
      if (dtype == NULL) {
          ^~~~~    ~~~~
  build/src.macosx-10.9-x86_64-3.11/numpy/core/include/numpy/__multiarray_api.h:112:40: note: declared 'nonnull' here
  NPY_NO_EXPORT NPY_STEALS_REF_TO_ARG(2) NPY_GCC_NONNULL(2) PyObject * PyArray_CastToType \
                                         ^
  numpy/core/include/numpy/npy_common.h:81:43: note: expanded from macro 'NPY_GCC_NONNULL'
  #define NPY_GCC_NONNULL(n) __attribute__((nonnull(n)))
                                            ^
  clang: numpy/core/src/multiarray/alloc.c
  clang: numpy/core/src/multiarray/array_assign_scalar.c
  clang: numpy/core/src/multiarray/arrayobject.c
  clang: numpy/core/src/multiarray/compiled_base.c
  clang: numpy/core/src/multiarray/array_assign_array.c
  clang: numpy/core/src/multiarray/arrayfunction_override.c
  1 warning generated.
  clang: numpy/core/src/multiarray/conversion_utils.c
  clang: numpy/core/src/multiarray/buffer.c
  clang: build/src.macosx-10.9-x86_64-3.11/numpy/core/src/multiarray/arraytypes.c
  clang: numpy/core/src/multiarray/ctors.c
  numpy/core/src/multiarray/arraytypes.c.src:65:26: error: expression is not assignable
      Py_TYPE(&new_fields) = NULL;
      ~~~~~~~~~~~~~~~~~~~~ ^
  1 error generated.
  clang: numpy/core/src/multiarray/datetime_busday.c
  clang: numpy/core/src/multiarray/common.c
  clang: numpy/core/src/multiarray/dtype_transfer.c
  clang: numpy/core/src/multiarray/common_dtype.c
  clang: numpy/core/src/multiarray/datetime_busdaycal.c
  clang: numpy/core/src/multiarray/convert.c
  clang: numpy/core/src/multiarray/descriptor.c
  clang: numpy/core/src/multiarray/hashdescr.c
  clang: numpy/core/src/multiarray/item_selection.c
  clang: numpy/core/src/multiarray/datetime.c
  numpy/core/src/multiarray/item_selection.c:2092:1: warning: unused function 'count_nonzero_bytes_384' [-Wunused-function]
  count_nonzero_bytes_384(const npy_uint64 * w)
  ^
  clang: build/src.macosx-10.9-x86_64-3.11/numpy/core/src/multiarray/einsum.c
  numpy/core/src/multiarray/einsum.c.src:408:32: warning: unknown warning group '-Wmaybe-uninitialized', ignored [-Wunknown-warning-option]
  #pragma GCC diagnostic ignored "-Wmaybe-uninitialized"
                                 ^
  clang: numpy/core/src/multiarray/dtypemeta.c
  1 warning generated.
  clang: build/src.macosx-10.9-x86_64-3.11/numpy/core/src/multiarray/einsum_sumprod.c
  clang: numpy/core/src/multiarray/dragon4.c
  clang: numpy/core/src/multiarray/datetime_strings.c
  1 warning generated.
  clang: numpy/core/src/multiarray/iterators.c
  clang: numpy/core/src/multiarray/mapping.c
  clang: numpy/core/src/multiarray/nditer_constr.c
  clang: numpy/core/src/multiarray/legacy_dtype_implementation.c
  clang: build/src.macosx-10.9-x86_64-3.11/numpy/core/src/multiarray/lowlevel_strided_loops.c
  clang: numpy/core/src/multiarray/methods.c
  clang: numpy/core/src/multiarray/nditer_pywrap.c
  clang: numpy/core/src/multiarray/multiarraymodule.c
  clang: numpy/core/src/multiarray/number.c
  clang: numpy/core/src/multiarray/refcount.c
  clang: numpy/core/src/multiarray/sequence.c
  clang: numpy/core/src/multiarray/shape.c
  clang: numpy/core/src/multiarray/scalarapi.c
  numpy/core/src/multiarray/scalarapi.c:767:37: warning: 'ob_shash' is deprecated [-Wdeprecated-declarations]
              ((PyBytesObject *)obj)->ob_shash = -1;
                                      ^
  /Users/josephkarpinski/anaconda3/envs/env3114Exoplanet/include/python3.11/cpython/bytesobject.h:7:5: note: 'ob_shash' has been explicitly marked deprecated here
      Py_DEPRECATED(3.11) Py_hash_t ob_shash;
      ^
  /Users/josephkarpinski/anaconda3/envs/env3114Exoplanet/include/python3.11/pyport.h:336:54: note: expanded from macro 'Py_DEPRECATED'
  #define Py_DEPRECATED(VERSION_UNUSED) __attribute__((__deprecated__))
                                                       ^
  1 warning generated.
  clang: build/src.macosx-10.9-x86_64-3.11/numpy/core/src/multiarray/scalartypes.c
  clang: numpy/core/src/multiarray/flagsobject.c
  clang: numpy/core/src/multiarray/getset.c
  clang: build/src.macosx-10.9-x86_64-3.11/numpy/core/src/multiarray/nditer_templ.c
  clang: numpy/core/src/multiarray/typeinfo.c
  clang: numpy/core/src/multiarray/usertypes.c
  clang: numpy/core/src/multiarray/vdot.c
  clang: build/src.macosx-10.9-x86_64-3.11/numpy/core/src/npysort/quicksort.c
  clang: numpy/core/src/multiarray/strfuncs.c
  clang: numpy/core/src/multiarray/temp_elide.c
  clang: build/src.macosx-10.9-x86_64-3.11/numpy/core/src/npysort/timsort.c
  clang: numpy/core/src/multiarray/nditer_api.c
  clang: build/src.macosx-10.9-x86_64-3.11/numpy/core/src/npysort/mergesort.c
  clang: numpy/core/src/umath/umathmodule.c
  clang: numpy/core/src/umath/reduction.c
  clang: build/src.macosx-10.9-x86_64-3.11/numpy/core/src/umath/loops.c
  clang: numpy/core/src/umath/ufunc_object.c
  clang: numpy/core/src/umath/extobj.c
  clang: build/src.macosx-10.9-x86_64-3.11/numpy/core/src/umath/scalarmath.c
  clang: build/src.macosx-10.9-x86_64-3.11/numpy/core/src/npysort/heapsort.c
  clang: build/src.macosx-10.9-x86_64-3.11/numpy/core/src/npysort/radixsort.c
  clang: build/src.macosx-10.9-x86_64-3.11/numpy/core/src/npysort/selection.c
  clang: numpy/core/src/common/array_assign.c
  clang: numpy/core/src/common/mem_overlap.c
  clang: numpy/core/src/common/npy_argparse.c
  clang: numpy/core/src/umath/ufunc_type_resolution.c
  clang: numpy/core/src/common/npy_longdouble.c
  clang: numpy/core/src/common/ucsnarrow.c
  clang: numpy/core/src/common/ufunc_override.c
  clang: numpy/core/src/common/numpyos.c
  clang: numpy/core/src/umath/override.c
  clang: build/src.macosx-10.9-x86_64-3.11/numpy/core/src/common/npy_cpu_features.c
  clang: numpy/core/src/common/cblasfuncs.c
  clang: numpy/core/src/common/python_xerbla.c
  clang: build/src.macosx-10.9-x86_64-3.11/numpy/core/src/npysort/binsearch.c
  clang: build/src.macosx-10.9-x86_64-3.11/numpy/core/src/umath/matmul.c
  clang: build/src.macosx-10.9-x86_64-3.11/numpy/core/src/umath/clip.c
  error: Command "clang -DNDEBUG -fwrapv -O2 -Wall -fPIC -O2 -isystem /Users/josephkarpinski/anaconda3/envs/env3114Exoplanet/include -fPIC -O2 -isystem /Users/josephkarpinski/anaconda3/envs/env3114Exoplanet/include -DNPY_INTERNAL_BUILD=1 -DHAVE_NPY_CONFIG_H=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE=1 -D_LARGEFILE64_SOURCE=1 -DNO_ATLAS_INFO=3 -DHAVE_CBLAS -Ibuild/src.macosx-10.9-x86_64-3.11/numpy/core/src/common -Ibuild/src.macosx-10.9-x86_64-3.11/numpy/core/src/umath -Inumpy/core/include -Ibuild/src.macosx-10.9-x86_64-3.11/numpy/core/include/numpy -Ibuild/src.macosx-10.9-x86_64-3.11/numpy/distutils/include -Inumpy/core/src/common -Inumpy/core/src -Inumpy/core -Inumpy/core/src/npymath -Inumpy/core/src/multiarray -Inumpy/core/src/umath -Inumpy/core/src/npysort -Inumpy/core/src/_simd -I/Users/josephkarpinski/anaconda3/envs/env3114Exoplanet/include/python3.11 -Ibuild/src.macosx-10.9-x86_64-3.11/numpy/core/src/common -Ibuild/src.macosx-10.9-x86_64-3.11/numpy/core/src/npymath -c build/src.macosx-10.9-x86_64-3.11/numpy/core/src/multiarray/arraytypes.c -o build/temp.macosx-10.9-x86_64-3.11/build/src.macosx-10.9-x86_64-3.11/numpy/core/src/multiarray/arraytypes.o -MMD -MF build/temp.macosx-10.9-x86_64-3.11/build/src.macosx-10.9-x86_64-3.11/numpy/core/src/multiarray/arraytypes.o.d -msse3 -I/System/Library/Frameworks/vecLib.framework/Headers -msse -msse2 -msse3" failed with exit status 1
  
  ########### EXT COMPILER OPTIMIZATION ###########
  Platform      :
    Architecture: x64
    Compiler    : clang
  
  CPU baseline  :
    Requested   : 'min'
    Enabled     : SSE SSE2 SSE3
    Flags       : -msse -msse2 -msse3
    Extra checks: none
  
  CPU dispatch  :
    Requested   : 'max -xop -fma4'
    Enabled     : SSSE3 SSE41 POPCNT SSE42 AVX F16C FMA3 AVX2 AVX512F AVX512CD AVX512_KNL AVX512_SKX AVX512_CLX AVX512_CNL AVX512_ICL
    Generated   :
                :
    SSE41       : SSE SSE2 SSE3 SSSE3
    Flags       : -msse -msse2 -msse3 -mssse3 -msse4.1
    Extra checks: none
    Detect      : SSE SSE2 SSE3 SSSE3 SSE41
                : build/src.macosx-10.9-x86_64-3.11/numpy/core/src/umath/loops_arithmetic.dispatch.c
                :
    AVX2        : SSE SSE2 SSE3 SSSE3 SSE41 POPCNT SSE42 AVX F16C
    Flags       : -msse -msse2 -msse3 -mssse3 -msse4.1 -mpopcnt -msse4.2 -mavx -mf16c -mavx2
    Extra checks: none
    Detect      : AVX F16C AVX2
                : build/src.macosx-10.9-x86_64-3.11/numpy/core/src/umath/loops_arithm_fp.dispatch.c
                : build/src.macosx-10.9-x86_64-3.11/numpy/core/src/umath/loops_arithmetic.dispatch.c
                :
    (FMA3 AVX2) : SSE SSE2 SSE3 SSSE3 SSE41 POPCNT SSE42 AVX F16C
    Flags       : -msse -msse2 -msse3 -mssse3 -msse4.1 -mpopcnt -msse4.2 -mavx -mf16c -mfma -mavx2
    Extra checks: none
    Detect      : AVX F16C FMA3 AVX2
                : build/src.macosx-10.9-x86_64-3.11/numpy/core/src/umath/loops_trigonometric.dispatch.c
                : build/src.macosx-10.9-x86_64-3.11/numpy/core/src/umath/loops_exponent_log.dispatch.c
                :
    AVX512F     : SSE SSE2 SSE3 SSSE3 SSE41 POPCNT SSE42 AVX F16C FMA3 AVX2
    Flags       : -msse -msse2 -msse3 -mssse3 -msse4.1 -mpopcnt -msse4.2 -mavx -mf16c -mfma -mavx2 -mavx512f
    Extra checks: AVX512F_REDUCE
    Detect      : AVX512F
                : build/src.macosx-10.9-x86_64-3.11/numpy/core/src/umath/loops_arithm_fp.dispatch.c
                : build/src.macosx-10.9-x86_64-3.11/numpy/core/src/umath/loops_arithmetic.dispatch.c
                : build/src.macosx-10.9-x86_64-3.11/numpy/core/src/umath/loops_trigonometric.dispatch.c
                : build/src.macosx-10.9-x86_64-3.11/numpy/core/src/umath/loops_exponent_log.dispatch.c
                :
    AVX512_SKX  : SSE SSE2 SSE3 SSSE3 SSE41 POPCNT SSE42 AVX F16C FMA3 AVX2 AVX512F AVX512CD
    Flags       : -msse -msse2 -msse3 -mssse3 -msse4.1 -mpopcnt -msse4.2 -mavx -mf16c -mfma -mavx2 -mavx512f -mavx512cd -mavx512vl -mavx512bw -mavx512dq
    Extra checks: AVX512BW_MASK AVX512DQ_MASK
    Detect      : AVX512_SKX
                : build/src.macosx-10.9-x86_64-3.11/numpy/core/src/umath/loops_arithmetic.dispatch.c
                : build/src.macosx-10.9-x86_64-3.11/numpy/core/src/umath/loops_exponent_log.dispatch.c
  CCompilerOpt.cache_flush[804] : write cache to path -> /private/var/folders/dq/st7fgsjx563_949h03nbvtj00000gn/T/pip-install-khh0ueha/numpy_e52b4ed6c6084cf0a796f094f160f396/build/temp.macosx-10.9-x86_64-3.11/ccompiler_opt_cache_ext.py
  
  ########### CLIB COMPILER OPTIMIZATION ###########
  Platform      :
    Architecture: x64
    Compiler    : clang
  
  CPU baseline  :
    Requested   : 'min'
    Enabled     : SSE SSE2 SSE3
    Flags       : -msse -msse2 -msse3
    Extra checks: none
  
  CPU dispatch  :
    Requested   : 'max -xop -fma4'
    Enabled     : SSSE3 SSE41 POPCNT SSE42 AVX F16C FMA3 AVX2 AVX512F AVX512CD AVX512_KNL AVX512_SKX AVX512_CLX AVX512_CNL AVX512_ICL
    Generated   : none
  CCompilerOpt.cache_flush[804] : write cache to path -> /private/var/folders/dq/st7fgsjx563_949h03nbvtj00000gn/T/pip-install-khh0ueha/numpy_e52b4ed6c6084cf0a796f094f160f396/build/temp.macosx-10.9-x86_64-3.11/ccompiler_opt_cache_clib.py
  [end of output]

note: This error originates from a subprocess, and is likely not a problem with pip.
ERROR: Failed building wheel for numpy
Failed to build numpy
ERROR: Could not build wheels for numpy, which is required to install pyproject.toml-based projects

Screen Shot 2023-08-16 at 9 50 35 PM

Issue on page /tutorials/quick-tess.html

Hi! What kind of lightcurve download this script? This is result of aperture photometry? Or this is just raw counts from one star? What about corrections, applied here?

import numpy as np
import lightkurve as lk
import matplotlib.pyplot as plt
lcfs = lk.search_lightcurve("TIC 286923464", mission="TESS", author="SPOC").download_all(flux_column="pdcsap_flux")
......

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