Comments (1)
Hi, yes in dmasif the matching labels between two points from two different proteins is based on the distance between their xyz coordinates. This is the same way it was done for masif.
The distance between their descriptors gives you the prediction of whether the points are matching or not (both in masif and dmasif).
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Related Issues (20)
- How to predict the interface characters of single protein? HOT 1
- dMaSIF for interaction prediction, how to find complementary regions? HOT 2
- No save model checkpoints for site prediction HOT 2
- Input seems to require a y value HOT 2
- Running you example does not provide same ROC-AUC as claimed in the paper HOT 14
- Using main_training.py
- Problems regarding loss function and auroc
- Does anyone have a docker image that can run this project? Can you share it with me? HOT 4
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- How to mathematically define the binding surface? HOT 1
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from dmasif.