Comments (2)
FreyrS
commented on July 21, 2024
Hi there and thanks!
The meshpoints are the points from our previous method (https://github.com/LPDI-EPFL/masif), you can extract them from the ply files in surface_data/raw/01-benchmark_surfaces.
from dmasif.
orange2350
commented on July 21, 2024
May I ask if you've solved it? By extracting using masif, does the author mean one of the files in the pre-calculated part using masif? Or is it something else? Thank you! @hypnopump
from dmasif.
Related Issues (20)
- How to predict the interface characters of single protein? HOT 1
- dMaSIF for interaction prediction, how to find complementary regions? HOT 2
- No save model checkpoints for site prediction HOT 2
- Input seems to require a y value HOT 2
- Running you example does not provide same ROC-AUC as claimed in the paper HOT 14
- Using main_training.py
- Problems regarding loss function and auroc
- Does anyone have a docker image that can run this project? Can you share it with me? HOT 4
- How to replace with my own dataset
- why the interface is computed like this ? HOT 4
- About helper.py
- Pre-trained model in Hugging face
- [Question] Are ligands or PTMs considered
- How to mathematically define the binding surface? HOT 1
- Why "iface_preds " contain NAN when training dmasif_ HOT 7
- Return value in diagonal_ranges function
- embedding example HOT 1
- faces of the protein surface
- RuntimeError: operation does not have an identity.
- TypeError: argument of type 'method' is not iterable HOT 2
Recommend Projects
-
React
A declarative, efficient, and flexible JavaScript library for building user interfaces.
-
Vue.js
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
-
Typescript
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
-
TensorFlow
An Open Source Machine Learning Framework for Everyone
-
Django
The Web framework for perfectionists with deadlines.
-
Laravel
A PHP framework for web artisans
-
D3
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
-
Recommend Topics
-
javascript
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
-
web
Some thing interesting about web. New door for the world.
-
server
A server is a program made to process requests and deliver data to clients.
-
Machine learning
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
-
Visualization
Some thing interesting about visualization, use data art
-
Game
Some thing interesting about game, make everyone happy.
Recommend Org
-
Facebook
We are working to build community through open source technology. NB: members must have two-factor auth.
-
Microsoft
Open source projects and samples from Microsoft.
-
Google
Google ❤️ Open Source for everyone.
-
Alibaba
Alibaba Open Source for everyone
-
D3
Data-Driven Documents codes.
-
Tencent
China tencent open source team.
from dmasif.