fullerjamesr / xmipp

All Xmipp except Core and Visualization

xmipp

If you want to use it as a Scipion package, please visit this.

To install Xmipp in a certain place (e.g. in the xmipp-bundle directory) follow this instructions:

mkdir xmipp-bundle
cd xmipp-bundle
wget https://raw.githubusercontent.com/I2PC/xmipp/devel/xmipp -O xmipp
chmod 755 xmipp
./xmipp all N=4 br=devel
ln -sf src/xmipp/xmipp xmipp  # optional, but VERY RECOMMENDED, to have always the last version of the xmipp script

where you can replace N=4 for N=#processors and br=master for br=devel if you want the development version of Xmipp. You can see the whole usage of the xmipp script with ./xmipp --help

Using Scipion libraries

If you want xmipp to pick up SCIPION libraries define SCIPION_HOME=<path to scipion>