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CYCASP is a methodology for investigating and understanding (C)olon(Y) growth and (C)ell (A)ttributes at the population level. It couples (SP)atiotemporal changes by relying on two novel data abstractions and a modular algorithm.

Home Page: https://doi.org/10.3389/fbioe.2018.00017

License: MIT License

Python 100.00%
microfluidics time-series cell particle patch trajectory lineage abstraction dimensions feature

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Cycasp usage

Hi,
Is there any comprehensive tutorial regarding this package? I recently learned trackpy and am learning bits of custom feature detection and image analysis. This package seems a good (non-machine learning) approach for single-cell bacterial detection. I have datasets that look like
initial:
bac gif1

final:
bac gif2

The problem is isolating single features at a later stage and tracking.

Thank you in advance

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