gher-uliege / divand_hfradar.jl Goto Github PK

Hello,

I have been trying to use this package and keep getting the same errors when running Pkg.add("DIVAnd_HFRadar"). I'm wondering if anyone has seen this before.

Updating registry at `~/.julia/registries/General.toml`

Resolving package versions...
Installed Adapt ─────────────── v3.4.0
Installed Scratch ───────────── v1.1.1
Installed URIs ──────────────── v1.4.0
Installed TranscodingStreams ── v0.9.6
Installed LoggingExtras ─────── v0.4.9
Installed SimpleBufferStream ── v1.1.0
Installed Mustache ──────────── v1.0.14
Installed StaticArrays ──────── v1.5.2
Installed NCDatasets ────────── v0.11.9
Installed NetCDF_jll ────────── v400.702.402+0
Installed MbedTLS ───────────── v1.1.1
Installed HDF5_jll ──────────── v1.12.2+1
Installed LogExpFunctions ───── v0.3.17
Installed Glob ──────────────── v1.3.0
Installed ChainRulesCore ────── v1.15.3
Installed HTTP ──────────────── v1.2.0
Installed CodecZlib ─────────── v0.7.0
Installed ChangesOfVariables ── v0.1.4
Installed DIVAnd_HFRadar ────── v0.1.0
Installed DocStringExtensions ─ v0.9.1
Installed Pluto ─────────────── v0.19.11
Downloaded artifact: NetCDF
Downloaded artifact: HDF5
Updating ~/.julia/environments/v1.7/Project.toml
[7f46824f] + DIVAnd_HFRadar v0.1.0
[85f8d34a] ↓ NCDatasets v0.12.5 ⇒ v0.11.9
[c3e4b0f8] ↑ Pluto v0.19.9 ⇒ v0.19.11
Updating ~/.julia/environments/v1.7/Manifest.toml
[79e6a3ab] ↑ Adapt v3.3.3 ⇒ v3.4.0
[d360d2e6] ↑ ChainRulesCore v1.15.1 ⇒ v1.15.3
[9e997f8a] ↑ ChangesOfVariables v0.1.3 ⇒ v0.1.4
[944b1d66] + CodecZlib v0.7.0
[7f46824f] + DIVAnd_HFRadar v0.1.0
[ffbed154] ↑ DocStringExtensions v0.8.6 ⇒ v0.9.1
[c27321d9] + Glob v1.3.0
[cd3eb016] ↑ HTTP v0.9.17 ⇒ v1.2.0
[2ab3a3ac] ↑ LogExpFunctions v0.3.15 ⇒ v0.3.17
[e6f89c97] + LoggingExtras v0.4.9
[739be429] ↑ MbedTLS v1.1.0 ⇒ v1.1.1
[ffc61752] ↑ Mustache v1.0.13 ⇒ v1.0.14
[85f8d34a] ↓ NCDatasets v0.12.5 ⇒ v0.11.9
[c3e4b0f8] ↑ Pluto v0.19.9 ⇒ v0.19.11
[6c6a2e73] ↑ Scratch v1.1.0 ⇒ v1.1.1
[777ac1f9] + SimpleBufferStream v1.1.0
[90137ffa] ↑ StaticArrays v1.5.0 ⇒ v1.5.2
[3bb67fe8] + TranscodingStreams v0.9.6
[5c2747f8] ↑ URIs v1.3.0 ⇒ v1.4.0
[0234f1f7] ↑ HDF5_jll v1.12.0+1 ⇒ v1.12.2+1
[7243133f] ↑ NetCDF_jll v400.702.400+0 ⇒ v400.702.402+0
Precompiling project...
✗ NCDatasets
✗ DIVAnd
✗ DIVAnd_HFRadar
24 dependencies successfully precompiled in 20 seconds (54 already precompiled)
3 dependencies errored. To see a full report either run import Pkg; Pkg.precompile() or load the packages

This leads to the following issue when trying to use the package:

ERROR: LoadError: InitError: could not load library "/home/charlesunderhill/.julia/artifacts/a990d3d23ca4ca4c1fcd1e42fc198f1272f7c49b/lib/libnetcdf.so"
libmbedtls.so.13: cannot open shared object file: No such file or directory
Stacktrace:
[1] macro expansion
@ ~/.julia/packages/JLLWrappers/QpMQW/src/products/library_generators.jl:54 [inlined]
[2] init()
@ NetCDF_jll ~/.julia/packages/NetCDF_jll/2PbeF/src/wrappers/x86_64-linux-gnu.jl:14
[3] top-level scope (repeats 2 times)
@ none:1
during initialization of module NetCDF_jll
in expression starting at /home/charlesunderhill/.julia/packages/NCDatasets/c8XyT/src/NCDatasets.jl:1
ERROR: LoadError: Failed to precompile NCDatasets [85f8d34a-cbdd-5861-8df4-14fed0d494ab] to /home/charlesunderhill/.julia/compiled/v1.7/NCDatasets/jl_CfHpOL.
Stacktrace:
[1] top-level scope (repeats 2 times)
@ none:1
in expression starting at /home/charlesunderhill/.julia/packages/DIVAnd/Mbj6v/src/DIVAnd.jl:1
ERROR: LoadError: Failed to precompile DIVAnd [efc8151c-67de-5a8f-9a35-d8f54746ae9d] to /home/charlesunderhill/.julia/compiled/v1.7/DIVAnd/jl_u44IXt.
Stacktrace:
[1] top-level scope (repeats 2 times)
@ none:1
in expression starting at /home/charlesunderhill/.julia/packages/DIVAnd_HFRadar/bVLSN/src/DIVAnd_HFRadar.jl:3
ERROR: LoadError: Failed to precompile DIVAnd_HFRadar [7f46824f-871f-4a07-b57f-28974f6a6036] to /home/charlesunderhill/.julia/compiled/v1.7/DIVAnd_HFRadar/jl_8V9VQh.
in expression starting at /home/charlesunderhill/DIVAnd_HFRadartest.jl:1