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View Code? Open in Web Editor NEWGenomeViewer is a webbased viewer for GFF3 genome annotations
Home Page: http://genomeviewer.org
GenomeViewer is a webbased viewer for GFF3 genome annotations
Home Page: http://genomeviewer.org
== Getting started 1. Install the shared GenomeTools library (libgenometools.[so|dylib]) on your system. The library can be obtained via http://genometools.org If you do not have root prvileges on your machine make sure that the GenomeTools library can be found by your OS. 2. Put the path to the gtruby files in the environment variable GTRUBY If you are using a bash shell use export GTRUBY=/path/to/gtruby 3. Navigate to the GenomeViewer directory 3.1 Start the GenomeTools server (script/gt_server) 3.2 Setup the database used by GenomeViewer - Usually this can be done with "rake db:load" - If you want to preload an example user (login:foo/pass:foo) use "rake db:load_with_foo" instead 3.3 Start the web server (script/server) 3.4 Optional: start the session daemon (script/session_daemon) == Possible problems 1. In case the rake process or the server processes produce an error message saying somthing like "can't convert nil into String" you probabely did not set the GTRUBY variable in your current environment.
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