Comments (6)
mhemberg
commented on July 28, 2024
- Magic and scImpute (and maybe more) (Martin)
- Adapt one of their tutorials. Do clustering for small and large datasets. (Vlad)
- Discuss batch correction methods (Tallulah)
- Cross-dataset comparisons (Vlad)
- Introduction to BioConductor classes (Davies)
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mhemberg
commented on July 28, 2024
- Internal batch correction (as before) AND Compare across datasets
- Mapping/projection
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tallulandrews
commented on July 28, 2024
Shall we remove the edgeR DE stuff from the counfounders chapter? It isn't very useful & somewhat off-topic.
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wikiselev
commented on July 28, 2024
Yes, I agree, please feel free to do it. I have updated everything until clustering chapters. Hopefully will be able to build the new version tomorrow, will let you know.
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wikiselev
commented on July 28, 2024
I have removed DE stuff from confounders chapter
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tallulandrews
commented on July 28, 2024
To myself - may need to sort assayNames to make figures more interpret-able. & check how bit a mess it is with the millions of figures....
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Related Issues (20)
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