hina-shah / slicerbatchanonymize Goto Github PK
View Code? Open in Web Editor NEWSlicer extension to anonymize a batch of DICOM images.
License: Apache License 2.0
Slicer extension to anonymize a batch of DICOM images.
License: Apache License 2.0
I did not find it extension in Slicer Extension center.
Is there any other way to use this tool in Slicer?
The tool should be able to export to .gpil, .nrrd, .nii.gz
This will try to read all files in a directory as dicom files, and anonymize them accordingly.
Need to add a few more output formats.
Creating this as a separate issue because it seems like this might take more time in early investigation.
Not sure if this would be helpful. But if the output folder has an already created crosswalk file, we can load it to not redo deanonymization. The prefix pattern can be identified with a few files, and loaded in the GUI.
Need to do operations like
Not sure if these operations are necessary with the default dicom database in Slicer. These operations might be necessary when using a temporary database, or when creating a new database somewhere else (for example in the output directory).
Should be able to read files in a series format (i.e. one file per slice), and export to a format.
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