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Name: Belen Walker
Type: User
Name: Belen Walker
Type: User
igraph R package
Informatics for RNA-seq: A web resource for analysis on the cloud. Educational tutorials and working pipelines for RNA-seq analysis including an introduction to: cloud computing, critical file formats, reference genomes, gene annotation, expression, differential expression, alternative splicing, data visualization, and interpretation.
A data science IDE for Python
RSEM: accurate quantification of gene and isoform expression from RNA-Seq data
SQL-like query language for the SAM/BAM file format
A package for automated processing of single cell RNA-seq data in cancer
SCDC
Estimation of Single-Cell Potency with Single Cell Entropy
Quantifying metabolism activity at the single-cell resolution
scTyper: a comprehensive pipeline for the cell typing analysis of single-cell RNA-seq data
Weighted gene co-expression network analysis for scRNA-seq data in Seurat
The Self-Assembling-Manifold (SAM) algorithm.
SEQprocess: a modularized and customizable pipeline framework for NGS processing in R package
Community-provided extensions to Seurat
Various utility functions for Seurat v3
An interactive Shiny App for UpSet plots.
Shiny Interactive Web Apps for Single-Cell Data
a Shiny/R application to view and annotate copy number variations
Workflow for Nanopore Sequencing of 10x single cell libraries
Gene set enrichment analysis for single-cell RNAseq data
🐍🐍🐍 A systematic approach to parse strings and automate the conversion to snake_case, UpperCamelCase or any other case.
Converts snpeff annotations into MAF
Spatial mapping of cell types by integration of transcriptomics data
Project Website:
NGS workflow templates and sample data
GUI/CommandLine Tool Box for biologistists to utilize NGS data.
plots function for array
A declarative, efficient, and flexible JavaScript library for building user interfaces.
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
The Web framework for perfectionists with deadlines.
A PHP framework for web artisans
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
We are working to build community through open source technology. NB: members must have two-factor auth.
Open source projects and samples from Microsoft.
Google ❤️ Open Source for everyone.
Alibaba Open Source for everyone
Data-Driven Documents codes.
China tencent open source team.