isabella232 / ingest-broker

Scripts for brokering spreadsheets to ingest API, staging files and pushing bundles to datastore

This repository was part of HCA DCP/1 and is not maintained anymore. DCP/2 development of this component continues in the forked repository at https://github.com/ebi-ait/ingest-broker.

HCA Ingest Broker

Web endpoint for submitting spreadsheets for HCA Ingest and basic admin UI.

To run scripts locally you'll need Python 3.6 and all the dependencies in requirements.txt.

pip install -r requirements.txt
pip install -r requirements-dev.txt

Web Application

Running with Python

Start the web application with

python broker/broker_app.py

Alternatively, you can build and run the app with Docker. To run the web application with Docker for build the Docker image with

docker build . -t ingest-broker:latest

then run the Docker container. You will need to provide the URL to the Ingestion API

docker run -p 5000:5000 -e INGEST_API=http://localhost:8080 ingest-broker:latest

or run against the development Ingest API

docker run -p 5000:5000 -e INGEST_API=http://api.ingest.dev.data.humancellatlas.org ingest-broker:latest

The application will be available at http://localhost:5000