Name: Howard Hughes Medical Institute
Type: Organization
Bio: GitHub organization maintained by Scientific Computing Software at HHMI's Janelia Research Campus for use by HHMI staff and external collaborators.
Location: 19700 Helix Drive, Ashburn, VA 20147
Blog: http://www.janelia.org
Howard Hughes Medical Institute's Projects
Django SAML2 Authentication Made Easy. Easily integrate with SAML2 SSO identity providers like Okta
A service that trains DeepLabCut models
Code for generating images to be fed to a DMD
A SpikeGLX plugin for trigger-based online analysis
libraries for use with Eagle PCB
Configuration files, dashboards, and visualizations for ELK
Utilities for ELK stack configuration, maintenance, and use
Pipeline scripts and tools for reconstructing Electron Microscopy volumes.
Support multiple entrypoint scripts in a container for use in containerized scientific tools.
Lightweight custom REST API for ElasticSearch queries
a platform from monitoring animal behaviour in real time from a raspberry pi
Nextflow pipeline encapsulating workflows for analyzing expansion lattice light-sheet microscopy (ExLLSM) imagery
Exm large LM data processing pipeline
Neuron segmentation for expanded microscopy
Deep Neuron Network for synapse detection
LarvalOlympiad/ExtractionAndNavigationalAnalysisEtAl
Repository related to optical flow calculations for fibsem images
Fiji Dockerfiles for Docker builds.
FlyBoy database
Utility programs for synchronization with the Fly Facility's FLYF2 database
Code for analyzing FlyDisco experiments
Computational pipeline for analyzing videos for social behavior in flies
Analysis scripts for Fly Vision Box