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Name: Jineta Banerjee
Type: User
Bio: Neuroscience || Computational Biology || Open Science
Location: Seattle
Name: Jineta Banerjee
Type: User
Bio: Neuroscience || Computational Biology || Open Science
Location: Seattle
AWS CloudFormation templates for deploying Nextflow infrastructure
Neurofibromatosis EXperiment Unification Site
2019 San Francisco NF Hackathon
Data Ingest Shiny App
This repository hosts all the code used to generate analyses and figures for the landscape paper
Code to organize NF resources
Growing set of scripts to explore pdf publication using ChatGPT API
The analysis repository for the Open Pediatric Brain Tumor Atlas Project
LLM Chain for answering questions from documents with citations
Modules for Project Live apps across different projects
Python package for connecting services and building data pipelines
Python 2.7 implementation of network-based stratification (NBS) algorithm from Hofree et al (Nature Methods 2013)
Using Python for image processing and analysis
A cookbook of worked data recipes in R.
Creating R packages demo
Workflows for processing rare disease data on Synapse.
This repository hosts the source code for the analyses powering Distill website
Cluster single cell RNA-seq data
Informatics for RNA-seq: A web resource for analysis on the cloud. Educational tutorials and working pipelines for RNA-seq analysis including an introduction to: cloud computing, critical file formats, reference genomes, gene annotation, expression, differential expression, alternative splicing, data visualization, and interpretation.
Clone me to create your Manubot manuscript
Resources from my Rstudio::conf 2019 talk
In-progress and example CWL tools/workflows
Automation for the Sage AWS org-sagebase-sandbox account
An service to auto provision resources on AWS scicomp
Hierarchical, iterative clustering for analysis of transcriptomics data in R
Analysis of single cell RNA-seq data course
Scikit-image tutorials
A declarative, efficient, and flexible JavaScript library for building user interfaces.
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
The Web framework for perfectionists with deadlines.
A PHP framework for web artisans
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
We are working to build community through open source technology. NB: members must have two-factor auth.
Open source projects and samples from Microsoft.
Google ❤️ Open Source for everyone.
Alibaba Open Source for everyone
Data-Driven Documents codes.
China tencent open source team.