No documentation for brain_mask in intensity_normalization.normalize.fcm.find_tissue_mask about intensity-normalization

[jcreinhold]

Hi @goyal-aman. I'm not sure I understand. There is documentation about what the brain_mask argument should be in the docstring. See here.

Can you clarify what you mean?

[jcreinhold]

@goyal-aman No problem. My documentation isn't clear—you're question is good. The brain mask should be a binary array, the same size as the MR/CT image, which is 1 in the voxels/pixels corresponding to the brain and 0 in all other voxels/pixels.

Hope that helps. I am going to close this and factor this into my open issue regarding refactoring the package (#24).

[goyal-aman]

Hi @jcreinhold, sorry for not being clear. What I meant was I couldn't find anywhere in the documentation that what should be passed in the brain_mask argument. I am just getting started with brain_image processing. I apologise is question sound dumb.