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ngmlr

NGMLR is a long-read mapper designed to align PacBio or Oxford Nanopore (standard and ultra-long) to a reference genome with a focus on reads that span structural variations

nimtorch

PyTorch - Python + Nim

nlp_course

YSDA course in Natural Language Processing

nni

An open source AutoML toolkit for neural architecture search and hyper-parameter tuning.

not-hotdog

Built with TensorFlow, Yolov2 Tiny and React Native | Flutter | Javascript

nothotdog-classifier

What would you say if I told you there is a app on the market that tell you if you have a hotdog or not a hotdog.

nucleus

Python and C++ code for reading and writing genomics data.

ontology-mapper

openrefine

OpenRefine is a free, open source power tool for working with messy data and improving it

panorama3.0

Updating PANorama 2.0 (https://sourceforge.net/projects/panorama1/) from python2 to python3 compatibility

parliament2

Runs a combination of tools to generate structural variant calls on whole-genome sequencing data

pennylane

PennyLane is a cross-platform Python library for quantum machine learning, automatic differentiation, and optimization of hybrid quantum-classical computations

plantvillage_deeplearning_paper_analysis

playground

A Streamlit application to play with machine learning models directly from the browser

pop_gen_cnn

prepare4imagebreed

Scripts to process files into format as required by Imagebreed

probabilistic-programming-and-bayesian-methods-for-hackers

aka "Bayesian Methods for Hackers": An introduction to Bayesian methods + probabilistic programming with a computation/understanding-first, mathematics-second point of view. All in pure Python ;)

probabilistic_unet

A U-Net combined with a variational auto-encoder that is able to learn conditional distributions over semantic segmentations.

probability

Probabilistic reasoning and statistical analysis in TensorFlow

pyro

Deep universal probabilistic programming with Python and PyTorch

pysyft

A library for encrypted, privacy preserving deep learning - based on PyTorch

python-machine-learning-book-2nd-edition

The "Python Machine Learning (2nd edition)" book code repository and info resource

pytorch

Tensors and Dynamic neural networks in Python with strong GPU acceleration

qiskit-terra

Terra provides the foundations for Qiskit. It allows the user to write quantum circuits easily, and takes care of the constraints of real hardware.

rba

Recombinant Breakpoint Analysis on SNP data

rice-leaf-disease-analyzer

Ai powered web app that uses computer vision to detect three types of rice leaf diseases - Tensorflow.js

rtd_b4r_mapping

Map Rice Trait Dictionary trait and/or variable names to the Breeding4Rice variable names

singularity_recipes

Repository with all my Singularity recipes

skpro

Supervised domain-agnostic prediction framework for probabilistic modelling

sniffles

Structural variation caller using third generation sequencing