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ms_basecalling's Introduction

MS Basecalling

License

Description

This is the demo python library for Mass Spectrum based RNA seq base calling system. It's only a demo for my coding skill, and not supposed to be used in real world research and production.

Scripts

  • 'basecalling.py' contains the 'Basecalling' class, which has a method 'identify_basecallings' that identifies basecallings in the data.
  • 'server.py' contains the 'Server' class, which has methods 'start_server' and 'handle_client'.
  • 'client.py' contains the 'Client' class, which has methods 'connect_to_server', 'send_data', and 'receive_data'.
  • '_main_.py' is the main entry point of the program.

Installation

Run python setup.py install to install this package.

Usage

It can also run as python -m ms_basecalling without installation. Or you can run ms-basecalling command after installtion of the package.

License

This project is licensed under the MIT License.

Contact

ms_basecalling's People

Contributors

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