jonathanbrecher / sharedclustering

Tools to extract more information from DNA testing shared match lists

Shared Clustering

Tools to extract more information from DNA testing shared match lists.

Getting Started

See discussion in the Shared Clustering wiki

Contributing

Please create a new pull request with proposed changes

Author

• Jonathan Brecher

License

This project is licensed under the MIT License - see the LICENSE.md file for details

sharedclustering's Issues

System.InvalidOperationException: Sequence contains no elements

Trying to limit results to only those including my paternal aunt, I entered her ID in the "Filter Test IDs to" field on the Cluster tab. My aunt is shown (in the 4379 lines of results) when I run the cluster report without any ID to filter. Including her ID, however, I get the following error, with no results generated:

System.InvalidOperationException: Sequence contains no elements
at System.Linq.Enumerable.First[TSource](IEnumerable`1 source)
at AncestryDnaClustering.Models.HierarchicalClustering.HierarchicalClustering.d__7.MoveNext()
--- End of stack trace from previous location where exception was thrown ---
at System.Runtime.CompilerServices.TaskAwaiter.ThrowForNonSuccess(Task task)
at System.Runtime.CompilerServices.TaskAwaiter.HandleNonSuccessAndDebuggerNotification(Task task)
at System.Runtime.CompilerServices.TaskAwaiter.ValidateEnd(Task task)
at AncestryDnaClustering.ViewModels.AncestryDnaHierarchicalClusteringViewModel.d__83.MoveNext()
--- End of stack trace from previous location where exception was thrown ---
at System.Runtime.CompilerServices.TaskAwaiter.ThrowForNonSuccess(Task task)
at System.Runtime.CompilerServices.TaskAwaiter.HandleNonSuccessAndDebuggerNotification(Task task)
at AncestryDnaClustering.ViewModels.AncestryDnaHierarchicalClusteringViewModel.<<-ctor>b__7_0>d.MoveNext()
--- End of stack trace from previous location where exception was thrown ---
at System.Runtime.CompilerServices.AsyncMethodBuilderCore.<>c.b__6_0(Object state)
at System.Windows.Threading.ExceptionWrapper.InternalRealCall(Delegate callback, Object args, Int32 numArgs)
at System.Windows.Threading.ExceptionWrapper.TryCatchWhen(Object source, Delegate callback, Object args, Int32 numArgs, Delegate catchHandler)

Exception while processing Similarity

Describe the bug
A clear and concise description of what the bug is.
About 2 hours into processing my 177k Ancestry file, an exception was hit.

To Reproduce
Execute Similarity using default values

I can provide the txt file, too big to paste
Data File

Expected behavior
Should complete

Screenshots
If applicable, add screenshots to help explain your problem.

Desktop (please complete the following information):

• OS: Windows 10 Version 1903 Build 18362.145
• Browser Not relevant
• Version

Smartphone (please complete the following information):

Additional context
Add any other context about the problem here.
SharedClusteringLog.txt

Invalid username or password errors signing in to Ancestry

I went to the download tab, entered username & password and clicked Sign In. The first error message was Invalid Username or Password (it's not), and when retrying got other messages like saying an instance already running, and Unable to Sign In.

Exception when additionalMatchesDistinct is empty

An exception is thrown when additionalMatchesDistinct is empty (additionalMatchesDistinct.Count is 0) when clustering a file downloaded from Ancestry.

System.InvalidOperationException: Sequence contains no elements
at System.Linq.Enumerable.Max(IEnumerable1 source) at SharedClustering.HierarchicalClustering.ClusterExtender.<Recluster>d__7.MoveNext() in C:\Users\files\source\repos\sharedclustering-master\sharedclustering-master\src\SharedClustering.HierarchicalClustering\ClusterExtender.cs:line 131 --- End of stack trace from previous location where exception was thrown --- at System.Runtime.ExceptionServices.ExceptionDispatchInfo.Throw() at System.Runtime.CompilerServices.TaskAwaiter.HandleNonSuccessAndDebuggerNotification(Task task) at System.Runtime.CompilerServices.TaskAwaiter.GetResult() at SharedClustering.HierarchicalClustering.ClusterExtender.<MaybeExtendAsync>d__5.MoveNext() in C:\Users\files\source\repos\sharedclustering-master\sharedclustering-master\src\SharedClustering.HierarchicalClustering\ClusterExtender.cs:line 46 --- End of stack trace from previous location where exception was thrown --- at System.Runtime.ExceptionServices.ExceptionDispatchInfo.Throw() at System.Runtime.CompilerServices.TaskAwaiter.HandleNonSuccessAndDebuggerNotification(Task task) at System.Runtime.CompilerServices.TaskAwaiter1.GetResult()
at SharedClustering.HierarchicalClustering.HierarchicalClusterer.d__11.MoveNext() in C:\Users\files\source\repos\sharedclustering-master\sharedclustering-master\src\SharedClustering.HierarchicalClustering\HierarchicalClusterer.cs:line 152
--- End of stack trace from previous location where exception was thrown ---
at System.Runtime.ExceptionServices.ExceptionDispatchInfo.Throw()
at System.Runtime.CompilerServices.TaskAwaiter.HandleNonSuccessAndDebuggerNotification(Task task)
at System.Runtime.CompilerServices.TaskAwaiter`1.GetResult()
at AncestryDnaClustering.ViewModels.AncestryDnaHierarchicalClusteringViewModel.d__93.MoveNext() in C:\Users\files\source\repos\sharedclustering-master\sharedclustering-master\src\SharedClustering\ViewModels\AncestryDnaHierarchicalClusteringViewModel.cs:line 443
--- End of stack trace from previous location where exception was thrown ---
at System.Runtime.ExceptionServices.ExceptionDispatchInfo.Throw()
at System.Runtime.CompilerServices.TaskAwaiter.HandleNonSuccessAndDebuggerNotification(Task task)
at System.Runtime.CompilerServices.TaskAwaiter.GetResult()
at AncestryDnaClustering.ViewModels.AncestryDnaHierarchicalClusteringViewModel.<<-ctor>b__8_0>d.MoveNext() in C:\Users\files\source\repos\sharedclustering-master\sharedclustering-master\src\SharedClustering\ViewModels\AncestryDnaHierarchicalClusteringViewModel.cs:line 42
--- End of stack trace from previous location where exception was thrown ---
at System.Runtime.ExceptionServices.ExceptionDispatchInfo.Throw()
at System.Windows.Threading.ExceptionWrapper.InternalRealCall(Delegate callback, Object args, Int32 numArgs)
at System.Windows.Threading.ExceptionWrapper.TryCatchWhen(Object source, Delegate callback, Object args, Int32 numArgs, Delegate catchHandler)