Comments (1)
Please try to use Samtools (version==1.2). You can download it from https://github.com/jumphone/SPRINT/tree/master/samtools_and_bwa
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Related Issues (20)
- Error in Fetching A2I RES's from Sprint output HOT 1
- # HOT 19
- How to set the parameter -ss for non-strand-specific RNA-seq? Thank you. HOT 2
- Is the trimming first 6 bases step included in your pipeline? HOT 2
- Why the rate of A-to-G deteced by SPRINT is very low ? HOT 3
- Generated binary files not working HOT 6
- zz2sam.py hard-codes strandedness HOT 5
- how to calculate the no. of editing sites present in 3' UTRs and CDS and 5'TRS??? HOT 3
- Effect of editing sites on the condon changes HOT 3
- SPRINT installation Error HOT 7
- Differential RNA Editing HOT 3
- Error during run HOT 6
- Execution problem HOT 3
- No output after execution HOT 4
- import error HOT 3
- reverse strandedness -ss 1 or -ss 2 HOT 4
- No results in final result files HOT 2
- calculation time HOT 1
- What ref .fa file to use for sprint main after prepare? HOT 1
- Main command causing issue with getA2I.py HOT 8
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