junolab / language-weave

Atom syntax highlighting for Weave.jl and Pweave documents. Currently supports markdown input formats.

Atom support Weave.jl and Pweave

Atom syntax highlighting for Weave.jl and Pweave documents.

Provides the following modes:

• Weave.jl: markdown for .jmd, .mdw and .jmdw (markdown with noweb)
• Weave.jl: LaTex for texw, .jtexw and .jnw.
• Weave.jl: reStructuredText for .jrstw
• Pweave: markdown for .pmd and .pmdw (markdown with noweb)
• Pweave: LaTex for .ptexw and .pnw
• Pweave: reStructuredText for .prstw and .rstw

If you need support for other formats open as issue or make a pull request.

Run code using Hydrogen

Hydrogen supports running code from Pweave and Weave code chunks using its rich multi language document -feature.

For Python you simply need to install Hydrogen and you can use hydrogen keybindings to run code e.g ctrl-enter to run a line and ctrl-alt-enter to run entire chunk.

For Julia you need to add the following to .atom/keymap.cson if you want to use Hydrogen instead of Juno:

'.platform-linux .item-views > atom-text-editor[data-grammar="source weave md"],
.platform-linux .item-views > atom-text-editor[data-grammar="source weave latex"],
.platform-win32 .item-views > atom-text-editor[data-grammar="source weave md"],
.platform-win32 .item-views > atom-text-editor[data-grammar="source weave latex"]':
    'ctrl-enter': 'hydrogen:run'
    'shift-enter': 'hydrogen:run-and-move-down'

'.platform-darwin .item-views > atom-text-editor[data-grammar="source weave md"],
.platform-darwin .item-views > atom-text-editor[data-grammar="source weave latex"]':
    'cmd-enter': 'hydrogen:run'
    'shift-enter': 'hydrogen:run-and-move-down'

Run Julia code using Juno

If you have installed Juno, running code from Weave.jl documents works using ctrl-enter and shift-enter keybindings.