Heroku buildpack: R

NOTE: This version is DEPRECATED. Please use the heroku-16 branch.

This is a Heroku buildpack for applications which use R for statistical computing and CRAN for R packages.

R is ‘GNU S’, a freely available language and environment for statistical computing and graphics which provides a wide variety of statistical and graphical techniques: linear and nonlinear modelling, statistical tests, time series analysis, classification, clustering, etc. Please consult the R project homepage for further information.

CRAN is a network of ftp and web servers around the world that store identical, up-to-date, versions of code and documentation for R.

Usage

Example usage:

$ ls
init.r prog1.r prog2.r ...

$ heroku create --stack cedar-14 --buildpack http://github.com/virtualstaticvoid/heroku-buildpack-r.git#cedar-14

$ git push heroku master
...
-----> Heroku receiving push
-----> Fetching custom buildpack
-----> R app detected
-----> Vendoring R x.xx.x
       Executing init.r script
...
-----> R successfully installed

The buildpack will detect your app makes use of R if it has the init.r file in the root. The R runtime is vendored into your slug, and includes the gcc compiler for fortran support.

To reference a specific version of the build pack, add the Git branch or tag name to the end of the build pack URL.

$ heroku create --stack cedar-14 --buildpack http://github.com/virtualstaticvoid/heroku-buildpack-r.git#master

Installing R packages

During the slug compilation process, the init.r R file is executed. Put code in this file to install any packages you may require. See the Installing-packages for details. The list of available packages can be found at http://cran.r-project.org.

# Example `init.r` file

install.packages("nlme", dependencies = TRUE)

R packages can also be included in your project source and installed when the init.r file is executed.

install.packages("optional-path-to-packages/local-r-package-file.tar.gz", repos=NULL, type="source")

R Console

You can also run the R console application as follows:

$ heroku run R

Type q() to exit the console when you are finished.

Note that the Heroku slug is read-only, so any changes you make during the session will be discarded.

Scheduling a recurring job

You can use the Heroku scheduler to schedule a recurring R process.

The following command would run prog.r:

R -f ./prog.r --gui-none --no-save

Using in your applications

This buildpack can be used in conjunction with other supported language stacks on Heroku by using multiple buildpacks. See Using Multiple Buildpacks for an App.

See the example test applications which show how to use R from the console and various other examples.

R Binaries

The binaries used by the buildpack are hosted on AWS S3 at s3://heroku-buildpack-r.

See the heroku-buildpack-r-build repository for building the R binaries yourself.

R Versions

Optionally, the R version and buildpack version can be configured by providing a .r-version and .r-buildpack-version file in the root directory. These files should contain 1 line of text containing the respective version. See alternate-versions for an example.

The following versions are available:

Cedar 10

R Version	Buildpack Version	Binary
2.15.1	20131211-0028	R-2.15.1-binaries-20131211-0028.tar.gz
3.0.2	20140218-0019	R-3.0.2-binaries-20140218-0019.tar.gz
3.1.0	20141127-0021	R-3.1.0-binaries-20141127-0021.tar.gz
3.1.2	20150301-1046	R-3.1.2-binaries-20150301-1046.tar.gz

NB: Remember to use the http://github.com/virtualstaticvoid/heroku-buildpack-r.git#cedar branch for the buildpack URL.

Cedar 14

(all versions for cedar-14 have been rebuilt on 2016-07-20 due to improvements made to the build process)

R Version	Buildpack Version	Binary
3.1.0	20160720-0310	R-3.1.0-binaries-20160720-0310.tar.gz
3.1.1	20160720-0311	R-3.1.1-binaries-20160720-0311.tar.gz
3.1.2	20160720-0312	R-3.1.2-binaries-20160720-0312.tar.gz
3.1.3	20160720-0313	R-3.1.3-binaries-20160720-0313.tar.gz
3.2.0	20160720-0320	R-3.2.0-binaries-20160720-0320.tar.gz
3.2.1	20160720-0321	R-3.2.1-binaries-20160720-0321.tar.gz
3.2.2	20160720-0322	R-3.2.2-binaries-20160720-0322.tar.gz
3.2.3	20160720-0323	R-3.2.3-binaries-20160720-0323.tar.gz
3.2.4	20160720-0324	R-3.2.4-binaries-20160720-0324.tar.gz
3.2.5	20160720-0325	R-3.2.5-binaries-20160720-0325.tar.gz
3.3.0	20160720-0330	R-3.3.0-binaries-20160720-0330.tar.gz
3.3.1	20160720-0331	R-3.3.1-binaries-20160720-0331.tar.gz

NB: Remember to use the http://github.com/virtualstaticvoid/heroku-buildpack-r.git#cedar-14 branch for the buildpack URL.

See BUILDS for older/deprecated listing of builds.

Caveats

Due to the size of the R runtime, the slug size on Heroku, without any additional packages or program code, is approximately 90Mb. If additional R packages are installed by the init.r script then the slug size will increase.

Credits

Original inspiration from Noah Lorang's Rook on Heroku project.

kave / heroku-buildpack-r Goto Github PK