keithlohse / reprorehab2022

Keith personal copy of reprorehab2022

ReproRehab 2022

Educational Leadership Team

Name	Email
Sook-Lei Liew	[email protected]
James M. Finley	[email protected]
Keith Lohse	[email protected]
David Kennedy	[email protected]
Jean-Baptiste Poline	[email protected]

This github repository has information and materials for the ReproRehab program. If you're new to github, you can click the "clone or download" button on this repository to download a zip file.

SCHEDULE

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Everyone: W1 | W2 | W3

Pod-specific: W4-W7

Everyone: W8-24

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Week 1 (Oct. 10) - Intro to ReproRehab

Why do we need reproducible methods in rehabilitation? Overview and principles of reproducible science. (Slack, Github)

Meetings	Date	Time	Location
ReproRehab All Hands	Oct 12	3p EST	Zoom
Pods	Contact TA	---	Zoom

Content	Video
Welcome to ReproRehab (15:40)
Principles of Reproducible Science (1:12:44)
ReproRehab Housekeeping (8:49)
Meet your 2022-2023 ReproRehab Leadership Team and TAs (23:53)

Week 2 (Oct 17) - Reproducible Data Management/Organization

Basics of data organization, file formatting, naming for machine-readable data, meta- data. How to approach research questions with reproducibility in mind.

Meetings	Date	Time	Location
Pods	Contact TA	---	Zoom

Content	Video
Intro to Reproducible Principles for Data Analysis and Management (24:52)
Introduction to Data Analysis (39:42)
Data Standardization: A (very) short introduction (26:22)
DataLad Introduction (optional but highly recommended) (27:15)

Week 3 (Oct 24) - Open Datasets

FAIR data principles, open-source datasets, data transfer agreements, and ReproRehabDB (our database for courses/open datasets).

Meetings	Date	Time	Location
Pods	Contact TA	---	Zoom

Content	Video
Introduction to Week 3 (3:26)
Week 3: Introduction to FAIR Data (51:14)
NIH Data Sharing Policy (1:27:37)
Week 3: Open Data and Data Sharing in Rehabilitation (Part 2) (25:58)
Week 3: How to use ReproRehabDB (3:38)

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WEEKS 4-7: POD-SPECIFIC CONTENT

For these four weeks, pods will select a curriculum based on learner’s needs.

ReproRehab will provide introductory and/or intermediate course curricula with asynchronous videos and hands-on exercises in Matlab, R, and/or python, as well as on data archiving, data management, and more (and pods are welcome to chose course content from outside sources as well).

Meetings	Date	Time	Location
Pods	1/wk	Contact TA	Zoom

Content	Playlist
ReproRehab: Introduction to R
ReproRehab: Introduction to Matlab
First-Time Python, Unity, Arduinos, and Hardware/Software Integration
ReproRehab: Very First Time Programming in Python
ABCD-ReproNim Machine Learning Playlist

Week 4 (Oct 31)

Meetings	Date	Time	Location
Pods	Contact TA	---	Zoom

Week 5 (Nov 7)

Meetings	Date	Time	Location
Pods	TBD	---	SfN

Week 6 (Nov 14)

Meetings	Date	Time	Location
Pods	Contact TA	---	Zoom

Nov 21 - No class, Thanksgiving Break

Week 7 (Nov 28)

Meetings	Date	Time	Location
Pods	Contact TA	---	Zoom

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WEEKS 8 - 24: EVERYONE

Week 8 (Dec 5) - Launching into self-guided learning

What types of online learning opportunities are available to rehabilitation researchers?

Meetings	Date	Time	Location
ReproRehab All Hands	TBD	TBD	Zoom
Pods	Contact TA	---	Zoom

Weeks 9-24 (Dec 12 - Apr 3) - 4-MONTH SELF-GUIDED PROGRAM

Learning from online course materials and applying it to your own research; ASNR Meet-up

Meetings	Date	Time	Location
Pods	Contact TA	---	Zoom
Pods	TBD	---	ASNR

Week 24 (Apr 3) - Follow-up and evaluations

Presentations by Learners and TAs

Meetings	Date	Time	Location
Final ReproRehab All Hands	TBD	TBD	Zoom

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STAY UP TO DATE

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