Comments (1)
Reprex (after fixing some other issues with prefix matching...)
library(clustree)
data("iris_clusts")
x <- iris_clusts
x$L0.2 <- iris_clusts$K1
x$L0.4 <- iris_clusts$K2
x$L0.6 <- iris_clusts$K3
x$L0.8 <- iris_clusts$K4
x$L1.0 <- iris_clusts$K5
clustree_overlay(x, prefix = "L", x_value = "PC1", y_value = "PC2",
plot_sides = TRUE, use_colour = "points")
from clustree.
Related Issues (20)
- Node text alignment HOT 2
- Interpretation of cluster results HOT 1
- Release clustree 0.4.4
- Filtering nodes in the clustering graph HOT 2
- Allow plotting nodes as pie charts HOT 4
- Rotate node labels HOT 3
- Release clustree 0.5.0
- Error in check.length(gparname) : 'gpar' element 'lwd' must not be length 0 HOT 20
- Error in `dplyr::select()`: ! <text>:1:5: unexpected symbol HOT 8
- Error in check.length(gparname) : 'gpar' element 'lwd' must not be length 0 HOT 3
- Error for Seurat - gpar' element 'lwd' must not be length 0 HOT 1
- Problem using clustree with a Seurat object HOT 6
- Error: could not find function "try_fetch" HOT 3
- Error in `geom_edge_link()` Problem while converting geom to grob. HOT 2
- Clustree not accurate HOT 4
- Error: Less than two column names matched the prefix: SCT_snn_res. HOT 1
- Adding node specific labels HOT 2
- Is there a way to label edges? HOT 1
- Prepare for upcoming Seurat v5 release HOT 5
- The X portion of your clustering column names could not be converted to a number. Please check that your prefix and suffix are correct HOT 1
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from clustree.