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John lee's Projects

mriqc icon mriqc

Automated Quality Control and visual reports for Quality Assessment of structural (T1w, T2w) and functional MRI of the brain

nibabel icon nibabel

Python package to access a cacophony of neuro-imaging file formats

nimh_repro_2017_03 icon nimh_repro_2017_03

A workshop on open and reproducible neuroscience held in March, 2017. These materials will cover 1) Using Python and Github to produce & share reproducible processing pipelines, 2) Structuring and reporting your data using community-recognized standards, 3) Accessing and contributing to shared repositories, 4) Using pre-print servers

nipype icon nipype

Workflows and interfaces for neuroimaging packages

nobrainer icon nobrainer

Neural networks for labelling structural magnetic resonance images

orient icon orient

A robust algorithm for registering 3d images to a template.

pandas icon pandas

Flexible and powerful data analysis / manipulation library for Python, providing labeled data structures similar to R data.frame objects, statistical functions, and much more

pangeo icon pangeo

A place to discuss and track issues related to the Pangeo project

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