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leicn's Projects

fastp icon fastp

A FASTQ preprocessor with full features (QC/adapters/trimming/filtering/splitting...)

get_homologues icon get_homologues

GET_HOMOLOGUES: a versatile software package for pan-genome analysis

predict.genes.by.exonerate.pipeline icon predict.genes.by.exonerate.pipeline

Perl pipeline for prediction of genes based on Guy Slater’s Exonerate. As used in Brown et al. Characterisation of retroviruses in the horse genome and their transcriptional activity via transcriptome sequencing. Virology in press 2012 and Tarlinton et al. Characterisation of a group of endogenous gammaretroviruses in the canine genome. The Veterinary Journal in press 2012

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