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Runs a pubmed query, returns results and allows user to explore high-level structure of returned documents
Repository for the RStudio AI Blog (formerly: TensorFlow for R Blog)
ALTered Regulatory Elements
An R Shiny app that accepts a CSV file with data, and outputs high level regression analysis.
Source code for ScanGEO Shiny App
Integrated analysis of genomes, transcriptomes, proteomes and drug responses of cancer cell lines (CCLs) is an emerging approach to uncover molecular mechanisms of drug action. We extend this paradigm to measuring proteome activity landscapes by acquiring and integrating quantitative data for 10,000 proteins and 55,000 phosphorylation sites (p-sites) from 125 CCLs. These data are used to contextualize proteins and p-sites and predict drug sensitivity. For example, we find that Progesterone Receptor (PGR) phosphorylation is associated with sensitivity to drugs modulating estrogen signaling such as Raloxifene. We also demonstrate that Adenylate kinase isoenzyme 1 (AK1) inactivates antimetabolites like Cytarabine. Consequently, high AK1 levels correlate with poor survival of Cytarabine-treated acute myeloid leukemia patients, qualifying AK1 as a patient stratification marker and possibly as a drug target. We provide an interactive web application termed ATLANTiC (http://atlantic.proteomics.wzw.tum.de), which enables the community to explore the thousands of novel functional associations generated by this work.
A curated list of awesome R packages, frameworks and software.
An awesome R-shiny list!
Examples of kallisto + sleuth
Visualization of scRNA-seq data.
R package containing the Cerebro application.
Search for a set of compatible indexes for your sequencing experiment
Toolkit of helper functions to pre-process amplification data
Interactive visualisation and data annotation for meta-omics data
Cluster Identity Predictor (R package implementation)
Repository for Shiny implementation of CIPR
CiteFuse:
An interactive heatmap visualization built using D3.js
:bar_chart:statistical analysis and visualization of functional profiles for genes and gene clusters
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Shiny based application for correlation analysis
Statistics and Probability for Data Analytics
Shiny app
A package for automated quantification of non-orthogonal, multiplexed ddPCR data
A framework for deploying self-contained R-based applications to the desktop
Interactive multivariate data analysis in R implemented in shiny.
DiffNetFDR
Web interface for DNABarcodeCompatibility
A declarative, efficient, and flexible JavaScript library for building user interfaces.
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
The Web framework for perfectionists with deadlines.
A PHP framework for web artisans
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
We are working to build community through open source technology. NB: members must have two-factor auth.
Open source projects and samples from Microsoft.
Google ❤️ Open Source for everyone.
Alibaba Open Source for everyone
Data-Driven Documents codes.
China tencent open source team.