lizbethmg / 2024_mondragon-gonzalez_natureneuroscience

This is a guide to the code and data for the paper Mondragón-González, S. L., Schreiweis C, C., & Burguière E, E. (2024). Closed-loop recruitment of striatal parvalbumin interneurons prevents compulsive-like grooming behaviours. Nature Neuroscience

Closed-loop recruitment of striatal interneurons prevents compulsive-like grooming behaviours.

This is a guide to the code and data for the paper Mondragón-González, S. L., Schreiweis C, C., & Burguière E, E. (2024). Closed-loop recruitment of striatal parvalbumin interneurons prevents compulsive-like grooming behaviours. Nature Neuroscience. Link to Paper. Each listed repository is dedicated to a specific type of analysis or dataset. Please follow the links provided to explore the repositories in detail.

Table of Contents

• Repository 1: Closed-loop - TriFilterNet
• Repository 2: Data Set 1
• Repository 3: Analysis LFP
• Repository 4: Data Set 2
• Citation

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Repository 1: Closed-loop - TriFilterNet

Description: Designed to detect pre-grooming events in mice by analyzing local field potential (LFP) recordings. It uses triangular filters for feature selection, reducing data to a matrix of decorrelated coefficients. These coefficients are the input for an artificial neural network to classify behavioral states. It includes its own demo data.

• Code: Link to code
• Related Data: Link to Related Data

Repository 2: Data Set 1

Description: It features the electrophysiological recordings and the associated grooming markers used in the paper to asses the closed-loop algorithm. The data is compressed and available at the Open Science Framework.

• Data Repository: Link to Data Set 1
• DOI: 10.17605/OSF.IO/KDMJT

Repository 3: Analysis LFP

Description: This repository contains the local field potential analysis scripts and functions.

• Code: Link to code
• Related Data: Data Set 2

Repository 4: Data Set 2

Description: It features the electrophysiological recordings in the mice's orbitofrontal cortex around grooming events. The data is available at the Open Science Framework.

• Data Repository: Link to Data Set 2
• DOI: 10.17605/OSF.IO/KDMJT

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Citation

If you use this code or data we kindly ask you to cite our work.

• Data:

(APA style) Mondragón-González, S. L. (2024, March 26). 2024_Mondragon-Gonzalez_NatureNeuroscience. https://doi.org/10.17605/OSF.IO/KDMJT

• Article: Mondragon et al 2024: DOI

@article{Mondragon2024, title = {Closed-loop recruitment of striatal interneurons prevents compulsive-like grooming behaviours}, author = {Sirenia Lizbeth Mondragón-González and Christiane Schreiweis and Eric Burguière}, journal = {Nature Neuroscience}, year = {2024}, url = {https://www.nature.com/articles/s41593-024-01633-3}}