Bioconductor contributions
Package | BioC-devel | BioC-release |
---|---|---|
edgeR | ||
scater | ||
SingleCellExperiment | ||
iSEE | ||
iSEEu | ||
TSCAN |
Package | BioC-devel | BioC-release |
---|---|---|
TENxBrainData | ||
scDblFinder | ||
zellkonverter | ||
velociraptor | ||
snifter | ||
PCAtools | ||
DelayedMatrixStats |
Name: Aaron Lun
Type: User
Company: @Genentech
Bio: It/Its (ノಠ益ಠ)ノ彡┻━┻
Twitter: realAaronLun
Location: San Francisco
Package | BioC-devel | BioC-release |
---|---|---|
edgeR | ||
scater | ||
SingleCellExperiment | ||
iSEE | ||
iSEEu | ||
TSCAN |
Package | BioC-devel | BioC-release |
---|---|---|
TENxBrainData | ||
scDblFinder | ||
zellkonverter | ||
velociraptor | ||
snifter | ||
PCAtools | ||
DelayedMatrixStats |
Ontology processing for Bioconductor
PCAtools: everything Principal Components Analysis
PCG — C++ Implementation
Some comments on how to determine the number of PCs to retain.
A fluent interface to SummarizedExperiment
Lightweight C++ library for power iterations
Some thoughts on choosing an appropriate pseudo-count for log-transformation of scRNA-seq counts.
A quick-and-dirty t-SNE implementation as a header-only library
Read-only mirror of R source code from https://svn.r-project.org/R/, updated hourly. See the build instructions on the wiki page.
Fork of wch's r-source that uses a virtual library.
A rainbow-ized Bioconductor sticker.
Rcpp bindings for Annoy
Rcpp bindings for the approximate nearest neighbors library HNSW
Read and write RDS files in C++
Clone of the Bioconductor repository for the rebook package.
Utilities for analyzing repertoire sequencing data, to be used in the OSCA book.
Clone of the Bioconductor repository for the ResidualMatrix package.
R Interface to Python
Package providing an interface between HDF5 and R
Randomized Matrix Decompositions using R
R wrapper for Van der Maaten's Barnes-Hut implementation of t-Distributed Stochastic Neighbor Embedding
Tests the Rtsne package against the original bhtsne implementation.
Proof of concept for run-time linking of C++ libraries via R
Foundation of vector-like and list-like containers in Bioconductor
The R package "sarlacc" contains a pipeline to analyse nanopore sequencing data. It trims adapter sequences, retrieves optional UMI's, clusters reads and produces a consensus sequence for each cluster after multiple sequence alignment.
Clone of the Bioconductor repository for the ScaledMatrix package.
A simple, efficient tool to detect doublet cells directly from scRNAseq count data
A command line interface to scran
A slimmed down version of scran, based on the C++ library of the same name.
Julia bindings for the libscran library.
A declarative, efficient, and flexible JavaScript library for building user interfaces.
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
The Web framework for perfectionists with deadlines.
A PHP framework for web artisans
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
We are working to build community through open source technology. NB: members must have two-factor auth.
Open source projects and samples from Microsoft.
Google ❤️ Open Source for everyone.
Alibaba Open Source for everyone
Data-Driven Documents codes.
China tencent open source team.