m-hakmi Goto Github PK
Type: User
Type: User
MiGA: Microbial Genomes Atlas
script, hack and firmware mod for Mijia 4K
MiniMD Molecular Dynamics Mini-App
BioLiP2 database curation and web interface
Molecular modeling scripts and things
Python scripts to generate an MD-ready model from smiles strings
mmCIF-based extension dictionary for computed structure models
A collection of pre-trained, state-of-the-art models in the ONNX format
Implementation of Enhancing Drug-Drug Interaction Extraction from Texts by Molecular Structure Information
Interactive web based visualization of the kinetics of macromolecule processes
Two scripts for MD interaction analysis (similar to interaction fraction on desmond).
Some representative scripts and codes which I wrote for the purposes of: building structures, generating input files for MD simulations, and analyzing MD output files (e.g. atomic trajectories and log files).
Sample codes for my book on molecular dynamics simulation
The scripts here describe the process of producing a 100 ns Molecular Dynamics Simulation, the trajectory analysis and the calculations with the MMGBSA and MMPBSA methods. The scripts are writen for the AMBER suit.
Generate nice icons of molecules with a python script
Code for "Multi-Objective De Novo Drug Design with Conditional Graph Generative Model" (https://arxiv.org/abs/1801.07299)
Molecular kaleidoscope
A molecular manipulation toolkit in Go
add-on to plotly which show molecule images on mouseover!
Protein and nucleic acid validation service
MolTrans: Molecular Interaction Transformer for Drug Target Interaction Prediction (Bioinformatics)
The main aim of MOZART (coMpOund enZyme interAction pRedicTor) is to identify the interaction between a compound and enzyme subclasses targets. The model implanted in the platform was developed using a multi-target machine learning model based on an artificial neural network multi-layer perceptron algorithm.
Molecular Substructure-Aware Network for Drug-Drug Interaction Prediction
Tools for preparation and analysis of systems for molecular dynamics.
Tool suite for HGVS variant descriptions
A declarative, efficient, and flexible JavaScript library for building user interfaces.
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
The Web framework for perfectionists with deadlines.
A PHP framework for web artisans
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
We are working to build community through open source technology. NB: members must have two-factor auth.
Open source projects and samples from Microsoft.
Google ❤️ Open Source for everyone.
Alibaba Open Source for everyone
Data-Driven Documents codes.
China tencent open source team.