Comments (2)
Hi,
Thanks for your interest in our method. I was tuning/running Higashi as well as cleaning code these days. I might have pushed some unfinished updates to the repo. I'll do a quick check and update the repo tomorrow.
from higashi.
I looked into the Process.py code, and "generate_feat_one" function isn't used. It might be the reason of the error.
from higashi.
Related Issues (20)
- Higahi stop at train_for_imputation_nbr_0 on both API and CLI.
- Conda install doesn't work as expected HOT 1
- Moudle import error HOT 2
- Problem on running FastHigashi on Ramani et al. dataset HOT 1
- Higashi_vis set up HOT 2
- Higashi gets error during higashi_model.process_data() HOT 2
- Generating a hdf5 file for storing the coassayed signals HOT 2
- ValueError: Found array with 1 feature(s) (shape=(250, 1)) while a minimum of 2 is required by TruncatedSVD HOT 16
- Some question about json file
- some question about json file HOT 1
- NameError: name 'neg_num' is not defined HOT 10
- FastHigashi wrapper.prep_dataset: 'int' object has no attribute 'shape' HOT 9
- Some problem about color HOT 5
- question about cell order HOT 5
- Problem solved
- Error running Ramani data HOT 2
- higashi.process_data() won't finish HOT 20
- higashi.Higashi_backend.Modules import error HOT 5
- error when running scTAD.py HOT 1
- Error running simulated data
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from higashi.