marencc Goto Github PK

challenge_1

This github is for the coding challenge I signed up for march the 27th

challenge_nf

Wrapping into NF

cheatsheets-ai

Essential Cheat Sheets for deep learning and machine learning researchers

chip-seq-analysis

ChIP-seq analysis notes from Ming Tang

chip-seq-pipeline2

ENCODE ChIP-seq pipeline

chipseq

ChIP-seq peak-calling, QC and differential analysis pipeline.

cho_cell_microprotein_analysis

cite-seq_analysis

Code for using Drop-seq tools and a custom alignment script in order to quantify digital gene expression for an ADT 10X library. Geared for now towards lab-mates at the Broad Institute.

coding-interview-university

A complete computer science study plan to become a software engineer.

cog

Containers for machine learning

computational_biology

course material of Justin Fay

configs

Config files used to define parameters specific to compute environments at different Institutions

containerize-conda

Turn an existing conda environment into a Docker or Singularity container

crossspeciesintegration

Nextflow pipeline for cross-species integration and assessment of single cell RNA-seq datasets

cruk-summer-school-2018

Summer school course materials collection

data-science-interviews

Data science interview questions and answers

data-science-ipython-notebooks

Data science Python notebooks: Deep learning (TensorFlow, Theano, Caffe, Keras), scikit-learn, Kaggle, big data (Spark, Hadoop MapReduce, HDFS), matplotlib, pandas, NumPy, SciPy, Python essentials, AWS, and various command lines.

data-scientist-roadmap

Toturials coming with the "data science roadmap" picture.

dataanalysis

The lecture slides for Coursera's Data Analysis class

datasc_rafa_irizarry_2022

BST 260: Introduction to Data Science Fall 2022 Course Repository

dc_atlas

DC_atlas_integration_CARMONALAB

deeplearningproject

An in-depth machine learning tutorial introducing readers to a whole machine learning pipeline from scratch.

deseq-workshop-1

deseq-workshop-2

dlbook_notation

LaTeX files for the Deep Learning book notation

docker-images

Repository of Docker images created by Continuum Analytics

docker-rclone

Docker image to use rclone to run cron sync with monitoring

epivia

Identify vector integration site with both bulk and single-cell epigenomic assays

estadistica-con-r

Apuntes personales sobre estadística, machine learning y lenguaje de programación R

excelerate-scrnaseq

Single RNA-seq data analysis with R (Finland, May, 2019)