meyermagic / cgdata Goto Github PK
View Code? Open in Web Editor NEWThis project forked from ucsccancer/cgdata
Python API to work with the cgData standard
This project forked from ucsccancer/cgdata
Python API to work with the cgData standard
cgData - Cancer Genome Browser Input/Output tools This python module is designed to do tasks associated with data preperation associated with Genome/Clinical files to be added to the Cancer Genome Browser http://genome-cancer.ucsc.edu ===Most of these tools are still in developement=== Tools: compileCancerData.py - Take collection of data and produce SQL for cancer genome browser compileScan.py - Do checks on avalible data (doesn't produce actual SQL) bed2probeMap.py - Convert bed12 probe file to probeMap format getRefGene_hg18.sh - Download refgene program from Genome Browser database extractFeatures.py, extractProbes.py, extractGenomic.py, extractSamples.py, extractClinical.py - Extract data stored in previous mySQL schema ( to help with transition to cgData 1.0 ) tcgaAliquotSampleMap.sh - Produce sample map from TCGA sample report
A declarative, efficient, and flexible JavaScript library for building user interfaces.
๐ Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
The Web framework for perfectionists with deadlines.
A PHP framework for web artisans
Bring data to life with SVG, Canvas and HTML. ๐๐๐
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
We are working to build community through open source technology. NB: members must have two-factor auth.
Open source projects and samples from Microsoft.
Google โค๏ธ Open Source for everyone.
Alibaba Open Source for everyone
Data-Driven Documents codes.
China tencent open source team.