Comments (2)
Hi,
The problem is that no spikes are found.
Loaded 0 spikes.
There are two possibilities:
- The data has strong fluctuations, e.g. some LFP signal. In this case you can try adding a bandpass (
filter=True
should do this). - The signal may be transposed.. What versions of spikeinterface do you have? Have you tried the latest herdingspikes? The issue is that the old spikenterface had the signal transposed in the extractor.
from hs2.
I tried with filter=True
but I have the same error.
I am using the latest version of Spikeinterface (0.93.0). I tried the latest herdingspikes but spikeinterface doesn't even detect the sorters. I have an error when running ss.installed_sorters(), but with the version 0.3.7, spikeinterface detect it.
Maybe it will help if I tell you that I am using INTAN files.
Thank you for your help.
from hs2.
Related Issues (20)
- Data lost at end of files HOT 1
- Save the version info in output files HOT 1
- `probe.py` path does not exist error when `RecordingExtractor` is called from SpikeToolkit
- Detection state is saving the wrong cutout_length
- Version in __version__ HOT 7
- clustering using DBSCAN HOT 1
- bug with HS 0.3.7 HOT 2
- Run `HS2` without probe file HOT 2
- version 0.3.99 fails at importing probe utils HOT 1
- Building wheel for herdingspikes (setup.py) ... error error: subprocess-exited-with-error HOT 3
- Version 0.3.100 fails at import HOT 3
- Localization difference between BioCam and RecordingExtractor objects HOT 4
- create_probe_files leading to write OSError HOT 3
- Cant run herdingspikes HOT 3
- Trouble running HS on Spikeinterface HOT 5
- HS on Spike Interface HOT 1
- Kernel died when using herdingspikes in SpikeInterface HOT 2
- Build fails on Windows 10 HOT 3
- HerdingSpike through SpikeInterface wrongly scales waveform. HOT 1
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from hs2.