Comments (1)
Solution for now, remove was_generated_by from AttributeValue, update range using any_of to include OmicsProcessing. In berkeley schema both DataGeneration and WorkflowExecution share a parent of PlannedProcess.
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Related Issues (20)
- `berkeley-schema-fy24`: Some migrators use incorrect collection name (instead of `mags_set`)
- Rename branches to eliminate Berkeley commits from `main` HOT 6
- 2024-06-18 `id` pattern validation summaries and SPARQL-based referential integrity checks on MongoDB contents with and without migration HOT 6
- Facilitate access to `nmdc_materialized_patterns` schema variant via PyPI package HOT 2
- produce a nmdc-schema YAML artifact with deprecated elements included HOT 1
- Remove WorkflowExeuctionActivity as a range for Database slot activity_set
- tighter pattern constraint on was_generated_by
- Migrator: Update `migrator_from_10_3_0_to_10_4_0.py` so it also updates `was_generated_by` values HOT 1
- Docker Compose shows warning saying `version` (specifier) is obsolete
- extra leading caret in `structured_pattern`s HOT 3
- remove logic to repair curies HOT 1
- replace uses of `nmdc_schema_merged.yaml` with `nmdc_schema/nmdc_materialized_patterns.yaml` HOT 3
- force update of `urllib3` version HOT 2
- `berkeley-schema-fy24`: Schema version underlying `SchemaView` instance changes from one release to the next HOT 1
- Add PR template to `nmdc-schema`
- Finalize metatranscriptome modeling for nmdc HOT 1
- MIxS Environmental Context slot grouping
- `known_as` slot needs description and `structured_pattern` constraints
- `berkeley-schema-fy24`: id slot_usage resulting in badly minted IDs HOT 19
- `berkeley-schema-fy24`: Update `part_16` migrator to include `metatranscriptome_expression_analysis_set` collection HOT 1
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