Comments (4)
Adding backlog label. Needs to be reprioritized.
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can we close this?
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can we close this?
Is it done @cmungall? We had removed it from a sprint because Bill didn't have time to work on it. Happy to close if it's done or not needed.
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src/nmdc_schema/get_json_schema.py
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Related Issues (20)
- Create before/after diagram of Workflow-related schema changes HOT 1
- Add descriptions to ProteolyticEnzymeEnum HOT 1
- Re-add OmicsProcessing typecode as a valid regex for DataGeneration HOT 1
- Update WorkflowExecution slot: `part_of` to be multi-valued HOT 1
- test if 'exhaustive' examples are really exhaustive
- What does the `see_also` of 'C01033' mean in the definition of `ChemicalConversionProcess` ?
- get `src/data/problem/valid/Database-img_mg_annotation_objects.yaml` to be clearly valid or clearly invalid, or delete it HOT 1
- the `slot_usage` of `part_of` in `classes.WorkflowExecution` should not have `multivalued: false` (berkeley schema) HOT 1
- subsets documentation pages should not reiterate descriptions
- Please replace `AFO:/process#AFP_0000112` mapping for `DissolvingProcess` in berkeley schema
- misc post-typing edits
- add `feature_category` slot to replace `type` as used by FunctionalAnnotation and GenomeFeature
- Schema contributors should run linkml linter
- Schema contributors should perform routine maintenance on their invalid example files HOT 2
- Schema contributors should ensure that there are no circular dependencies between YAML modules
- assign `feature_category` to `FunctionalAnnotation` and `GenomeFeature`
- add python test: classes should not reiterate inherited slots
- eliminate all "exhaustive biosample" examples except for one valid one
- use SPARQL construct instead of relationgraph for generating materialized visualization
- Should the schema build if a prefix is used without being specified HOT 1
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