Docker files and lesson materials for GEA RNA-Seq lesson
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Get the docker container:
$ docker pull genomicseducationalliance/rna-seq-leptin:dev_3.0
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Clone the repository with notebooks
$ git clone https://github.com/genomics-education-alliance/leptin-mouse-rnaseq.git
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Example:
$ docker run --name leptin -d -p 8888:8888 -v /some-absolute-path/:/home/gea_user/ genomicseducationalliance/rna-seq-leptin:dev_3.0
Datasets, worked-examples, and notebooks available on CyVerse: /iplant/home/shared/gea/rna-seq-leptin
You can launch a Jupyter lab session pre-loaded with data and notebooks on CyVerse: