neuroscout / neuroscout-paper

Neuroscout paper analysis repository

neuroscout-paper

This repository contains the analysis code for the analyses in the manuscript: "Neuroscout: a unified platform for generalizable and reproducible fMRI research"

Analyses in the paper required running models at the individual dataset / task level, following by a meta-analysis across all datasets and tasks. Code related to single task models is found in book/analyses/ while meta-analysis code is found in /book/meta. The Neuroscout model IDs for each analysis can be found under /book/analyses/models/.

The analyses are organized by Figure in the manuscript. Most analyses require first running single dataset results and then performing a meta-analysis for the final figure.

To view these notebooks, please see our Jupyter Book: https://neuroscout.github.io/neuroscout-paper/

Alternatively, you can view each individual notebook below, but note that some cell may not render correctly.

Figure 1

analyses/0-figure_1_methods.ipynb

Figures 3-4

analyses/1-single_predictor_models.ipynb

meta/1-single_predictor_models.ipynb

Figure 5

analyses/2-face_features.ipynb

meta/2-face_features.ipynb

Figure 6

analyses/3-language_features.ipynb

meta/3-language_features.ipynb