conda recepies about circrna

[BarryDigby]

@apeltzer Really appreciate you taking the time to check Alex. The conversion to DSL2 is going pretty smoothly, it's just the containers that are holding up the show (and linting, probably 🤖 ). Trying my best to have it ready for review next week

[BarryDigby]

Hi @apeltzer, I was away at a conference last week but have got around to creating PRs to add tools to bioconda. Have you permission to review and merge the above PRs?

Two areas of concern are detailed above, any guidance here would be greatly appreciated

[apeltzer]

I have

[apeltzer]

Hi @BarryDigby - just checked (sorry, super busy time right now at work): It looks quite good at the moment to me, e.g. targetscan biocontainer is here: https://quay.io/repository/biocontainers/targetscan

[apeltzer]

After x-checking, it seems not to have been uploaded - we should maybe ask in their Support Channel. I also opened an issue on bioconda to ask if something was odd there.

See here: bioconda/bioconda-recipes#38099

[BarryDigby]

@apeltzer Hey Alex, the workflow has been successfully converted to DSL2, the only catch being I am still waiting on those bioconda containers, and for a reason I cannot pin down, singularity fails to pull this image from quay despite it working perfectly fine for Docker. Irritating to say the least 😁

Given the deadline for the response to authors for BMC is December 5th... what's the gameplan here?

[apeltzer]

Just asked on the bioconda chat to unhide these & also asked whats going on with Singularity.

[apeltzer]

Singularity there in << 24hours, the quay.io should already be there. So "just" in time :-D